ERR1379167.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379167.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	517414
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGCTTATATCTCGTATGCC	834	0.16118620678992063	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCTCGT	95	42.63048	40
CTCGTAT	95	42.63048	42
TATCTCG	95	42.63048	39
TCGTATG	95	42.63048	43
CGGCTTA	95	42.63048	32
CGTATGC	100	40.49896	44
GACCGGC	100	40.49896	29
TCTCGTA	100	40.49896	41
AGACCGG	105	38.570435	28
ACCGGCT	110	36.817234	30
GAGACCG	110	36.817234	27
GCGGTTC	110	34.77183	8
GTATGCC	120	33.74913	45
AGCGGTT	115	33.260014	7
GAGCGGT	115	33.260014	6
CCGAGAC	125	32.399166	25
CGGTTCA	120	31.87418	9
AGAGCGG	130	31.159065	5
AAGAGCG	135	30.005024	4
CCGGCTT	135	29.999228	31