ERR1379072.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379072.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	458435
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATGAGCATCTCGTATGCC	481	0.10492218089805534	Illumina Paired End PCR Primer 2 (97% over 35bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGATGAG	95	37.89308	32
TCTCGTA	90	37.498363	41
CGGAAGA	100	36.018074	1
GAGCGGT	100	36.002357	6
AGAGCGG	100	36.002357	5
GCGGTTC	100	35.99843	8
CGGTTCA	100	35.99843	9
ACCGATG	105	34.284218	30
AGCGGTT	105	34.284218	7
ATCTCGT	100	33.748528	40
GAGACCG	100	33.748528	27
GACCGAT	110	32.725845	29
AGACCGA	110	32.725845	28
CGTATGC	105	32.141453	44
CTCGTAT	105	32.141453	42
AATGCCG	105	32.141453	21
ATGCCGA	105	32.141453	22
AAGAGCG	115	31.306398	4
CCGATGA	115	31.302984	31
CCGAGAC	110	30.68048	25