ERR1378932.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1378932.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	804077
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGAAAGCAATCTCGTATGCC	7064	0.8785228280376133	Illumina Paired End PCR Primer 2 (97% over 34bp)
TTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGAC	3584	0.44572845635430436	Illumina Paired End PCR Primer 2 (100% over 35bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	830	38.224213	42
TCTCGTA	830	38.224213	41
ATCTCGT	855	37.10655	40
TCGTATG	865	36.9354	43
CGTATGC	860	36.888515	44
CCGAAAG	870	36.72312	31
CGAAAGC	865	36.67529	32
AATCTCG	870	36.466778	39
GACCGAA	895	35.445946	29
GTATGCC	890	35.392277	45
AGACCGA	900	35.249023	28
ACCGAAA	925	34.29635	30
GAGACCG	935	33.929543	27
AGATCGG	650	31.845274	17
GATCGGA	650	31.845274	18
TATGCCG	110	30.680971	45
CGAGACC	1040	30.503963	26
ATCGGAA	675	30.332495	19
GCAATCT	1055	30.072128	37
AGCAATC	1065	29.78976	36