ERR1148449.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1148449.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1625110
Sequences flagged as poor quality	0
Sequence length	125
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12700	0.7814855609774107	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7005	0.43104774446037497	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	5332	0.3281008670182326	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	4605	0.2833654337244863	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3096	0.19051018084929636	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	2561	0.1575893324144212	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	2158	0.1327910110700199	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2141	0.13174492803564064	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	2126	0.13082191359354137	No Hit
GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	2098	0.12909895330162266	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC	1848	0.11371537926663426	No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA	1684	0.10362375469968187	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	180	42.944515	2
GGGTTAG	685	38.228443	1
ATGGGGG	3935	37.324074	5
GGTTAGA	690	37.055798	2
CATGGGG	6160	35.03989	4
GTTAGAG	785	34.84376	3
TGGGGGG	3220	33.05476	6
TACAACG	235	32.89367	2
TTAGAGC	870	31.439484	4
GTGGTTA	1000	30.352516	1
ATCACGC	315	30.202736	3
TAGAGCA	905	28.909523	5
CATGGGT	2170	28.771757	4
AACGCAG	21940	27.047724	6
GGTTAAG	1345	26.525637	3
GTATCAA	22715	26.017227	1
ACAACGC	320	26.014463	3
GTACATT	820	25.40263	1
GTACACT	2070	25.01344	1
ACATGGG	20930	24.744905	3