ERR1148379.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1148379.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3148050
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34715	1.1027461444386206	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19055	0.6052953415606487	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15792	0.5016438747796255	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	11570	0.3675291053191658	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	10942	0.34758024809008753	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7715	0.24507234637315164	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	5503	0.17480662632423247	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	4876	0.1548895347913788	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	4388	0.13938787503375105	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	4140	0.1315099823700386	No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA	3911	0.12423563793459443	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3690	0.11721541906894745	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC	3667	0.11648480805578057	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	3646	0.11581772843506297	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG	3615	0.11483299185209891	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	3278	0.10412795222439289	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3241	0.10295262146408095	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGCATA	305	37.049114	7
AACGCAT	350	33.9849	6
TATCACG	350	33.98328	2
ATGGGGG	6785	31.029694	5
CATGGGG	11095	29.911001	4
TTAACGC	460	27.150982	4
TGGGGGG	5595	26.999624	6
GTATCAA	55565	26.970499	1
AACGCAG	55725	26.745766	6
CGCATAG	450	26.432701	8
TACAACG	445	25.392002	2
TATCAAC	62020	24.058706	2
ATTAACG	445	24.056726	3
ACGCAGA	62290	23.936468	7
ATCAACG	62215	23.917526	3
CGCAGAG	62370	23.84855	8
TCAACGC	62980	23.834759	4
ATATGTA	2160	23.696232	1
CAACGCA	63595	23.604263	5
TCACGCA	605	23.592823	4