ERR1148378.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1148378.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3579441
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33619	0.9392248677936024	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18972	0.5300268952610198	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15558	0.4346488739442835	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	11566	0.3231230798328566	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	10874	0.3037904521963066	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7584	0.21187665895317176	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	5503	0.15373908942765085	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	4493	0.12552239302170365	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	4453	0.12440490009473547	No Hit
GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	4297	0.12004667767955947	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	4172	0.11655451228278382	No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA	3840	0.10727932098894771	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC	3689	0.10306078518964273	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3597	0.10049055145761587	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	320	35.314404	2
CATGGGG	13350	33.28219	4
ATGGGGG	9165	32.96885	5
TGGGGGG	7485	31.786356	6
CTATAGC	1360	31.052174	3
ACTATAG	1325	30.075108	2
TACAACG	340	27.989126	2
CACTATA	1425	27.5703	1
GTATCAA	53780	27.029457	1
AACGCAG	54925	26.61855	6
TATCAAC	60170	24.109049	2
TATAGCT	1890	23.917973	4
ACGCAGA	60965	23.90331	7
TATGTAA	2215	23.898165	2
TCAACGC	61245	23.881435	4
ATCAACG	60395	23.872847	3
CGCAGAG	60980	23.858416	8
ATATGTA	2125	23.810715	1
GGGTTAG	1075	23.810715	1
CAACGCA	61585	23.768908	5