Basic Statistics
Measure | Value |
---|---|
Filename | ERR1148293.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5436409 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 48951 | 0.9004289412367613 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 26514 | 0.4877116493626583 | No Hit |
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA | 25708 | 0.47288568612111415 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 25030 | 0.46041421828269363 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 24538 | 0.45136412657693703 | No Hit |
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG | 12414 | 0.22834926511231957 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12254 | 0.22540614585841498 | No Hit |
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG | 10278 | 0.18905862307269378 | No Hit |
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC | 8773 | 0.16137490759065404 | No Hit |
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 8576 | 0.15775119200928406 | No Hit |
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG | 8451 | 0.15545188009217112 | No Hit |
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA | 7965 | 0.14651215535843606 | No Hit |
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC | 7333 | 0.13488683430551307 | No Hit |
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC | 7254 | 0.1334336691738977 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 7173 | 0.1319437150516085 | No Hit |
GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC | 6587 | 0.1211645407841831 | No Hit |
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT | 5948 | 0.10941045826390178 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATGGGGG | 11580 | 0.0 | 38.36676 | 5 |
TATCACG | 575 | 0.0 | 38.271984 | 2 |
CATGGGG | 18355 | 0.0 | 34.930714 | 4 |
GGGTTAG | 2100 | 0.0 | 34.870045 | 1 |
TGGGGGG | 9800 | 0.0 | 34.41122 | 6 |
TATAACG | 595 | 0.0 | 33.986702 | 2 |
GTTAGAG | 2240 | 0.0 | 32.127758 | 3 |
TTAGAGC | 2530 | 0.0 | 31.031054 | 4 |
CGCATAG | 640 | 0.0 | 30.697336 | 1 |
GGTTAGA | 2270 | 0.0 | 30.393394 | 2 |
TACAACG | 800 | 0.0 | 28.994907 | 2 |
TAGAGCA | 2405 | 0.0 | 28.93436 | 5 |
GTTAAGA | 3390 | 0.0 | 26.667788 | 4 |
ACAACGC | 955 | 0.0 | 26.157064 | 3 |
CATGGGT | 7170 | 0.0 | 26.129705 | 4 |
GGTTAAG | 3445 | 0.0 | 24.688227 | 3 |
CTATAGC | 1425 | 0.0 | 23.790474 | 3 |
TAACGCA | 960 | 0.0 | 23.542656 | 4 |
GTGGTTA | 2630 | 0.0 | 23.542051 | 1 |
ATATGTA | 2640 | 0.0 | 22.776352 | 1 |