Basic Statistics
Measure | Value |
---|---|
Filename | ERR1148287.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4435291 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 34290 | 0.7731172543131893 | No Hit |
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA | 19885 | 0.44833585890982125 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 19856 | 0.4476820122963747 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 17855 | 0.40256659596856215 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 17455 | 0.3935480219899889 | No Hit |
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG | 9394 | 0.2118012098867921 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 8854 | 0.19962613501571824 | No Hit |
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG | 8012 | 0.18064203679082164 | No Hit |
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 7718 | 0.1740133849165703 | No Hit |
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC | 6818 | 0.15372159346478056 | No Hit |
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG | 6252 | 0.14096031128509945 | No Hit |
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA | 5948 | 0.1341061950613838 | No Hit |
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC | 5850 | 0.13189664443663338 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 5714 | 0.12883032928391847 | No Hit |
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC | 5626 | 0.12684624300863234 | No Hit |
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT | 4899 | 0.11045498480257554 | No Hit |
GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC | 4740 | 0.10687010164609266 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATCACG | 545 | 0.0 | 43.653515 | 2 |
ATGGGGG | 8720 | 0.0 | 33.763645 | 5 |
TACAACG | 570 | 0.0 | 32.347637 | 2 |
TATAACG | 480 | 0.0 | 32.217205 | 2 |
GGGTTAG | 1320 | 0.0 | 31.120901 | 1 |
CATGGGG | 14410 | 0.0 | 31.039484 | 4 |
TGGGGGG | 7375 | 0.0 | 29.51751 | 6 |
CGCATAG | 715 | 0.0 | 29.143316 | 1 |
GTTAAGA | 2775 | 0.0 | 28.292517 | 4 |
CATGGGT | 6615 | 0.0 | 28.053392 | 4 |
ATCACGC | 875 | 0.0 | 27.869965 | 3 |
CTATAGC | 1170 | 0.0 | 27.451656 | 3 |
TAACGCA | 720 | 0.0 | 26.434927 | 4 |
GGTTAAG | 2785 | 0.0 | 26.26882 | 3 |
TCACGCA | 945 | 0.0 | 25.805525 | 4 |
GTGGTTA | 2110 | 0.0 | 25.112188 | 1 |
TATGTAA | 2305 | 0.0 | 24.513676 | 2 |
GGTTAGA | 1590 | 0.0 | 24.31487 | 2 |
CACTATA | 1415 | 0.0 | 23.561806 | 1 |
ATATGTA | 2250 | 0.0 | 23.549652 | 1 |