FastQCFastQC Report
Fri 10 Feb 2017
ERR1148138.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1148138.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3521424
Sequences flagged as poor quality0
Sequence length125
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT124700.3541181067658993No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT64340.18271017633775427No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60630.17217466570341997No Hit

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA99750.054.740261
GGTATCA53250.044.840991
AACGCAG121750.043.7286876
TCAACGC125350.042.8524674
ATCAACG128000.042.10473
CAACGCA128550.041.739465
TATCAAC138900.039.061432
ACGCAGA138400.038.4679767
CGCAGAG141700.037.572118
GCAGAGT161150.033.2219129
GTACATG139300.031.4185851
ACATGGG138150.030.7008913
TACATGG146700.029.522752
AGAGTAC149150.029.27421210-11
CATGGGG75450.027.1213674
AGTACTT89750.024.98729712-13
CAGAGTA155700.024.85255610-11
GAGTACT77850.024.14575812-13
CGTATAC2302.3720713E-723.2770043
CATGGGT32050.022.8291364