Basic Statistics
Measure | Value |
---|---|
Filename | ERR1148110.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1208573 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 2255 | 0.1865836817469859 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1357 | 0.1122811778849933 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1298 | 0.10739938754216749 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 2735 | 0.0 | 66.16519 | 1 |
GGTATCA | 1235 | 0.0 | 56.87591 | 1 |
TCAACGC | 3740 | 0.0 | 48.03934 | 4 |
ATCAACG | 3820 | 0.0 | 47.18902 | 3 |
CAACGCA | 3890 | 0.0 | 46.186924 | 5 |
AACGCAG | 3945 | 0.0 | 45.99542 | 6 |
TATCAAC | 4150 | 0.0 | 43.43844 | 2 |
ACGCAGA | 4725 | 0.0 | 38.150703 | 7 |
CGCAGAG | 4860 | 0.0 | 36.968548 | 8 |
GTACATG | 5635 | 0.0 | 34.22665 | 1 |
GCAGAGT | 5330 | 0.0 | 33.708652 | 9 |
TACATGG | 6000 | 0.0 | 31.928925 | 2 |
ACATGGG | 5855 | 0.0 | 31.80381 | 3 |
CATGGGG | 3640 | 0.0 | 31.21718 | 4 |
TATGTAA | 655 | 0.0 | 29.066206 | 2 |
ATGGGGG | 1865 | 0.0 | 28.39049 | 5 |
AGAGTAC | 4770 | 0.0 | 28.31191 | 10-11 |
TGGGGGG | 1485 | 0.0 | 26.44108 | 6 |
TATATGT | 500 | 0.0 | 26.176668 | 4 |
ATATGTA | 670 | 0.0 | 25.765377 | 1 |