Basic Statistics
Measure | Value |
---|---|
Filename | ERR1148105.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2570794 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 16016 | 0.6229981865524815 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 8351 | 0.3248412747190168 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 8105 | 0.3152722466288625 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 11025 | 0.0 | 60.81489 | 1 |
GGTATCA | 5270 | 0.0 | 56.381954 | 1 |
AACGCAG | 14590 | 0.0 | 45.579742 | 6 |
TCAACGC | 15040 | 0.0 | 44.136887 | 4 |
ATCAACG | 15125 | 0.0 | 43.9675 | 3 |
CAACGCA | 15370 | 0.0 | 43.26665 | 5 |
TATCAAC | 15515 | 0.0 | 43.211536 | 2 |
ACGCAGA | 16975 | 0.0 | 39.210796 | 7 |
CGCAGAG | 17305 | 0.0 | 38.497433 | 8 |
GCAGAGT | 18575 | 0.0 | 35.993397 | 9 |
GTACATG | 16900 | 0.0 | 35.974037 | 1 |
TACATGG | 17340 | 0.0 | 35.027103 | 2 |
ACATGGG | 17095 | 0.0 | 34.82975 | 3 |
CATGGGT | 4340 | 0.0 | 33.441475 | 4 |
CATGGGG | 9170 | 0.0 | 31.849123 | 4 |
GTATACG | 100 | 4.4202415E-4 | 29.772833 | 1 |
AGAGTAC | 17820 | 0.0 | 29.490639 | 10-11 |
ATGGGGG | 4060 | 0.0 | 27.836391 | 5 |
AGTACTT | 8875 | 0.0 | 27.445484 | 12-13 |
GAGTACT | 8660 | 0.0 | 26.753147 | 12-13 |