FastQCFastQC Report
Fri 10 Feb 2017
ERR1148034.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1148034.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2702880
Sequences flagged as poor quality0
Sequence length125
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT339951.2577324927484757No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT194180.718418871722015No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT172290.6374311845142959No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT49140.181806073521577No Hit

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA259550.047.63821
AACGCAG312250.039.2441676
GGTATCA156650.038.5722961
TATCAAC332300.037.0917932
ATCAACG335500.036.6309433
TCAACGC337300.036.4354674
CAACGCA341750.035.926225
CATGGGT41200.034.9404534
ACGCAGA354800.034.638347
CGCAGAG356800.034.4275058
GCAGAGT376900.032.670419
CATGGGG148050.030.8174934
ATGGGTG28750.030.6220465
ACATGGG295400.030.1454433
GTACATG306200.029.9402481
TACATGG307300.029.7529282
GAGTACT173250.028.78990212-13
AGTACTT180350.028.76144412-13
AGAGTAC364250.027.34613410-11
ATGGGGG59900.026.4158865