ERR1147959.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1147959.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1980297
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29482	1.4887665840022986	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16071	0.8115449349264278	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14392	0.7267596729177492	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4875	0.24617519493288129	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3511	0.17729663782755817	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2527	0.12760712155802892	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2463	0.12437528310147417	No Hit
GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	2277	0.11498275258711194	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2146	0.10836758324635143	No Hit
GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2041	0.10306534827856628	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	21395	47.455704	1
AACGCAG	23605	42.536522	6
TATCAAC	26390	38.254265	2
GGTATCA	12790	37.94577	1
ACGCAGA	27145	37.03313	7
CGCAGAG	27235	36.91075	8
ATCAACG	27300	36.844658	3
TCAACGC	27460	36.673298	4
CAACGCA	27825	36.19223	5
GCAGAGT	28860	34.914883	9
GTACATG	23360	32.272842	1
ATGGGGG	5225	31.989952	5
TACATGG	23885	31.681028	2
ACATGGG	23255	31.666342	3
CATGGGG	12670	31.549046	4
CATGGGT	3260	30.83633	4
TGGGGGG	4235	28.231647	6
AGAGTAC	28705	27.570896	10-11
AGTACTT	15325	27.519423	12-13
GAGTACT	14875	27.252254	12-13