ERR1147953.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1147953.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1315732
Sequences flagged as poor quality	0
Sequence length	125
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9368	0.7119991001206933	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5419	0.41186199013172897	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4725	0.3591156861731721	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3309	0.25149498530095793	No Hit
GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	2635	0.20026874773890124	No Hit
GGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT	2122	0.16127904466867113	No Hit
GTACATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG	1907	0.144938330906294	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1633	0.12411342127424126	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1496	0.11370096645821488	No Hit
GGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAG	1389	0.10556861123693882	No Hit
GGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT	1375	0.10450456475938869	No Hit
GGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT	1358	0.10321250832236353	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2335	77.52193	1
GTATCAA	5425	68.59906	1
ATCAACG	7795	47.765816	3
TCAACGC	7840	47.56751	4
TATCAAC	7890	47.34685	2
GGGTTAG	710	46.964268	1
CAACGCA	7935	46.923065	5
AACGCAG	8000	46.76486	6
GTACATT	610	45.87815	1
GTGGTTA	1290	42.92706	1
ATGGGGG	4395	41.14089	5
ACGCAGA	9410	39.82079	7
CGCAGAG	9545	39.257584	8
GTACATG	9430	38.58046	1
GGTTAGA	875	38.070488	2
TAGAGCA	880	37.849865	5
TGGGGGG	3920	37.477432	6
CATGGGG	6430	37.46304	4
GCAGAGT	10090	37.13713	9
TACATGG	9845	37.098907	2