FastQCFastQC Report
Fri 10 Feb 2017
ERR1147803.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1147803.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6891733
Sequences flagged as poor quality0
Sequence length125
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT147670.2142712145116475No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT96350.13980518397912398No Hit

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA166550.049.0716361
GGTATCA84750.044.108731
TCAACGC189250.042.2742354
AACGCAG191300.041.8834046
CAACGCA193500.041.4686975
ATCAACG202350.039.5962263
ACGCAGA214700.037.3737077
CGCAGAG220100.036.4527978
TATCAAC226800.035.5646552
GCAGAGT252900.031.842629
GTACATG240200.029.9115491
ACATGGG233550.029.5948163
TACATGG255900.027.7081782
AGAGTAC244850.026.63429610-11
CATGGGG111200.025.8363844
GAGTACT113200.024.01056912-13
CAGAGTA262350.022.53398310-11
CATGGGA122400.021.188224
ATGGGGG53150.020.4803415
AGTACAT196850.019.32136512-13