Basic Statistics
Measure | Value |
---|---|
Filename | ERR1147796.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5895137 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 21232 | 0.3601612651241184 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11618 | 0.1970776930205354 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 9461 | 0.16048821257249832 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 6845 | 0.0 | 63.577343 | 1 |
GTATCAA | 14665 | 0.0 | 63.12578 | 1 |
TCAACGC | 19295 | 0.0 | 47.352585 | 4 |
CAACGCA | 19780 | 0.0 | 46.16144 | 5 |
ATCAACG | 20205 | 0.0 | 45.308224 | 3 |
AACGCAG | 20625 | 0.0 | 44.327904 | 6 |
TATCAAC | 21955 | 0.0 | 41.995514 | 2 |
ACGCAGA | 24255 | 0.0 | 37.669273 | 7 |
CGCAGAG | 25165 | 0.0 | 36.304634 | 8 |
GTACATG | 25035 | 0.0 | 32.507183 | 1 |
GCAGAGT | 28360 | 0.0 | 32.424335 | 9 |
TACATGG | 26255 | 0.0 | 30.880796 | 2 |
ACATGGG | 26185 | 0.0 | 30.50849 | 3 |
CATGGGG | 16210 | 0.0 | 28.512499 | 4 |
AGAGTAC | 26005 | 0.0 | 27.96122 | 10-11 |
CAGAGTA | 27315 | 0.0 | 24.812883 | 10-11 |
GAGTACT | 12905 | 0.0 | 24.796385 | 12-13 |
AGTACTT | 14395 | 0.0 | 24.068464 | 12-13 |
ATGGGGG | 8325 | 0.0 | 24.007795 | 5 |
GTACTTT | 15200 | 0.0 | 21.228546 | 14-15 |