Basic Statistics
Measure | Value |
---|---|
Filename | ERR1147483.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3167048 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 28712 | 0.9065855648540849 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 16782 | 0.5298940843334234 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 14958 | 0.47230101975088473 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 4582 | 0.1446773146475835 | No Hit |
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3607 | 0.11389154821777252 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 20285 | 0.0 | 51.0687 | 1 |
GGTATCA | 11425 | 0.0 | 49.504875 | 1 |
AACGCAG | 25175 | 0.0 | 40.967716 | 6 |
ATCAACG | 26735 | 0.0 | 38.649464 | 3 |
TCAACGC | 26855 | 0.0 | 38.53774 | 4 |
TATCAAC | 27385 | 0.0 | 37.8419 | 2 |
CAACGCA | 27390 | 0.0 | 37.763275 | 5 |
ACGCAGA | 28935 | 0.0 | 35.66466 | 7 |
CGCAGAG | 29260 | 0.0 | 35.349834 | 8 |
GCAGAGT | 31755 | 0.0 | 32.68477 | 9 |
GTACATG | 25335 | 0.0 | 32.053394 | 1 |
TACATGG | 25885 | 0.0 | 31.20967 | 2 |
ACATGGG | 25590 | 0.0 | 31.196514 | 3 |
CATGGGT | 6735 | 0.0 | 30.732914 | 4 |
CATGGGG | 12570 | 0.0 | 28.911327 | 4 |
ATGGGGG | 4820 | 0.0 | 28.505394 | 5 |
AGAGTAC | 30640 | 0.0 | 27.70112 | 10-11 |
TATAACG | 325 | 0.0 | 27.456516 | 2 |
GAGTACT | 16515 | 0.0 | 25.786749 | 12-13 |
AGTACTT | 17180 | 0.0 | 25.775295 | 12-13 |