FastQCFastQC Report
Fri 10 Feb 2017
ERR1147483.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1147483.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3167048
Sequences flagged as poor quality0
Sequence length125
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT287120.9065855648540849No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT167820.5298940843334234No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT149580.47230101975088473No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT45820.1446773146475835No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36070.11389154821777252No Hit

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA202850.051.06871
GGTATCA114250.049.5048751
AACGCAG251750.040.9677166
ATCAACG267350.038.6494643
TCAACGC268550.038.537744
TATCAAC273850.037.84192
CAACGCA273900.037.7632755
ACGCAGA289350.035.664667
CGCAGAG292600.035.3498348
GCAGAGT317550.032.684779
GTACATG253350.032.0533941
TACATGG258850.031.209672
ACATGGG255900.031.1965143
CATGGGT67350.030.7329144
CATGGGG125700.028.9113274
ATGGGGG48200.028.5053945
AGAGTAC306400.027.7011210-11
TATAACG3250.027.4565162
GAGTACT165150.025.78674912-13
AGTACTT171800.025.77529512-13