ERR1147466.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1147466.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3229911
Sequences flagged as poor quality	0
Sequence length	125
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27487	0.8510141610713112	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15893	0.4920569018774821	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14049	0.4349655454902628	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4842	0.14991125142457484	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4473	0.13848678802604777	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	3777	0.11693820665646824	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	3465	0.10727849776665672	No Hit
GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	3434	0.10631871899875879	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	18500	58.626347	1
GGTATCA	9200	57.97441	1
TATCACG	130	54.912544	2
AACGCAG	24595	44.03615	6
ATCAACG	24945	43.18721	3
TCAACGC	25270	42.60098	4
CAACGCA	25750	41.899254	5
TATCAAC	26040	41.60089	2
ACGCAGA	28705	37.710308	7
CGCAGAG	29115	37.097557	8
GTACATG	29015	36.169785	1
CATGGGT	8390	35.728504	4
TACATGG	29585	35.34931	2
ACATGGG	29330	35.067368	3
GCAGAGT	31040	34.87353	9
ATGGGGG	7665	34.141827	5
CATGGGG	14690	33.15953	4
AGAGTAC	30735	28.407898	10-11
ATGGGTG	4570	28.111488	5
TGGGGGG	6975	27.79839	6