FastQCFastQC Report
Fri 10 Feb 2017
ERR1147454.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1147454.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2488091
Sequences flagged as poor quality0
Sequence length125
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT191510.7697065742370356No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT113040.45432421884890867No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT94690.3805728970523988No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT35870.14416675274336832No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32440.13038108332854387No Hit

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA134550.051.936831
GGTATCA73300.051.078451
AACGCAG166200.041.654686
TCAACGC176750.039.2020074
ATCAACG176650.039.1615833
CAACGCA179600.038.5136955
TATCAAC189100.036.8708042
ACGCAGA194050.035.6764037
CGCAGAG197650.034.9965068
GCAGAGT209850.033.075299
GTACATG173900.032.7911721
TACATGG176950.032.039732
ATGGGGG39050.031.2235
ACATGGG180100.031.1122463
GTATACG1352.3247085E-630.8642181
CATGGGG94650.029.7222944
AGAGTAC203700.027.79634510-11
CATGGGT44200.026.3739744
GAGTACT109800.025.81085212-13
AGTACTT113850.025.78077312-13