FastQCFastQC Report
Fri 10 Feb 2017
ERR1147441.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1147441.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1548714
Sequences flagged as poor quality0
Sequence length125
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT116980.7553363629437068No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT74020.47794492721057596No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT61950.40000929803695195No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20830.13449868729797756No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT19730.12739602018190577No Hit

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATCA51550.051.395591
GTATCAA88100.048.9279671
AACGCAG106650.040.2112926
TATCACG1202.0792868E-839.6612632
TCAACGC112750.037.877524
ATCAACG113100.037.816563
TATCAAC115200.037.2340772
CAACGCA115600.036.892245
ACGCAGA122550.034.9941647
CGCAGAG125350.034.2124828
GCAGAGT131450.032.7605869
GTACATG111700.031.9277381
TACATGG114250.030.9826472
ACATGGG116300.029.8709373
ATACCGA1203.70517E-529.7401856
CATGGGG61550.028.894614
GGGTTAG4150.028.6930311
CATGGGT22600.027.6346864
ATGGGGG26750.027.1274975
AGAGTAC130200.027.09052310-11