ERR1147433.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1147433.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2745357
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29328	1.0682763662430788	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17405	0.6339794788073099	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14672	0.5344295842034388	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4690	0.1708338842635038	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4635	0.16883050182544565	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	2821	0.10275530650476422	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2816	0.10257318082857712	No Hit
GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	2801	0.1020268038000158	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	9570	0.0	60.283913	1
GTATCAA	18665	0.0	58.46878	1
AACGCAG	24765	0.0	44.047703	6
ATCAACG	25495	0.0	42.797394	3
TATCAAC	25860	0.0	42.378155	2
TCAACGC	25765	0.0	42.268856	4
CAACGCA	26375	0.0	41.313812	5
ACGCAGA	28765	0.0	37.88117	7
CGCAGAG	29165	0.0	37.402412	8
GCAGAGT	30680	0.0	35.57484	9
GTACATG	26670	0.0	35.13754	1
TACATGG	27205	0.0	34.268982	2
ACATGGG	27315	0.0	33.69474	3
CATGGGT	8865	0.0	33.345703	4
GTATCGC	180	6.0572347E-10	33.043785	6
TATAACG	245	0.0	31.56881	2
ATGGGGG	6360	0.0	31.516285	5
CATGGGG	13065	0.0	31.412458	4
ATGGGTG	4400	0.0	30.415298	5
AGAGTAC	30390	0.0	28.966318	10-11