ERR1147417.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1147417.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2767543
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	38349	1.3856695270859387	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22268	0.804612611258434	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19422	0.7017777140228715	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6513	0.23533509687112358	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4939	0.17846154513227075	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3353	0.12115439579439234	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3183	0.11501176314153023	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2783	0.10055850984067817	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	26700	47.43866	1
GGTATCA	15720	43.16427	1
AACGCAG	29895	41.83842	6
TATCAAC	34670	36.32155	2
ATCAACG	34760	36.173553	3
TCAACGC	34875	36.051666	4
ACGCAGA	34900	35.906548	7
CGCAGAG	35080	35.80708	8
CAACGCA	35435	35.397995	5
GCAGAGT	37300	33.85133	9
GTACATG	28865	32.786694	1
TACATGG	29485	32.09714	2
CATGGGG	15800	32.071335	4
ACATGGG	29330	31.75745	3
CATGGGT	5090	31.548632	4
ATGGGGG	5405	29.159813	5
AGAGTAC	37050	28.260662	10-11
ATGGGTG	3605	27.386553	5
AGTACTT	21550	27.184635	12-13
ATGGGGT	9130	26.317532	5