Basic Statistics
Measure | Value |
---|---|
Filename | ERR1147387.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3604904 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12952 | 0.35928834720702685 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 7399 | 0.20524818414027116 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 6988 | 0.19384704835413094 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 12355 | 0.0 | 47.0334 | 1 |
AACGCAG | 13595 | 0.0 | 42.000084 | 6 |
ACGCAGA | 15365 | 0.0 | 37.161804 | 7 |
TCAACGC | 15625 | 0.0 | 36.733765 | 4 |
GTACATG | 16455 | 0.0 | 36.29229 | 1 |
CGCAGAG | 15840 | 0.0 | 36.04742 | 8 |
CAACGCA | 16010 | 0.0 | 35.92471 | 5 |
ATCAACG | 16015 | 0.0 | 35.83922 | 3 |
GGTATCA | 7350 | 0.0 | 34.624622 | 1 |
TACATGG | 17480 | 0.0 | 34.0723 | 2 |
ACATGGG | 17115 | 0.0 | 34.05707 | 3 |
TATCAAC | 17305 | 0.0 | 33.349937 | 2 |
GCAGAGT | 17505 | 0.0 | 32.72068 | 9 |
CATGGGT | 5520 | 0.0 | 30.924377 | 4 |
CATGGGG | 8395 | 0.0 | 30.323633 | 4 |
AGAGTAC | 16830 | 0.0 | 28.502201 | 10-11 |
ATGGGGG | 3605 | 0.0 | 26.068134 | 5 |
CAGAGTA | 17390 | 0.0 | 23.82208 | 10-11 |
ATGGGTG | 3675 | 0.0 | 23.305761 | 5 |
ATGGGTA | 2585 | 0.0 | 23.239082 | 5 |