FastQCFastQC Report
Fri 10 Feb 2017
ERR1147383.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1147383.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4663817
Sequences flagged as poor quality0
Sequence length125
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT164830.3534229580620337No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT88710.1902090069142936No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT87420.1874430321772917No Hit

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA129400.052.6430851
GGTATCA67900.045.554051
AACGCAG161250.041.8319856
TCAACGC169050.039.8314744
ATCAACG171400.039.2506563
CAACGCA173100.038.8651775
ACGCAGA187800.035.8863647
TATCAAC190400.035.4762422
CGCAGAG193050.034.8796238
GTACATG199850.033.369931
GCAGAGT215450.031.4188969
ACATGGG204550.031.2901733
TACATGG211800.031.0761972
CATGGGG112800.027.7377854
AGAGTAC204300.027.36873210-11
CATGGGT51150.026.863434
ATGGGGG55400.026.735285
CAGAGTA214650.023.00076910-11
GAGTACT103650.022.6111212-13
AGTACTT121250.021.95363412-13