Basic Statistics
Measure | Value |
---|---|
Filename | ERR1147354.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4216982 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 10836 | 0.25696102093867135 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 5777 | 0.13699370782232412 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 5323 | 0.1262277145124167 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 10300 | 0.0 | 59.754578 | 1 |
GGTATCA | 5050 | 0.0 | 49.788517 | 1 |
TCAACGC | 13725 | 0.0 | 44.46323 | 4 |
AACGCAG | 14075 | 0.0 | 43.526604 | 6 |
ATCAACG | 14085 | 0.0 | 43.453472 | 3 |
CAACGCA | 14095 | 0.0 | 43.338245 | 5 |
TATCAAC | 16280 | 0.0 | 37.780735 | 2 |
ACGCAGA | 16545 | 0.0 | 36.992577 | 7 |
GTACATG | 20100 | 0.0 | 36.341473 | 1 |
CGCAGAG | 17240 | 0.0 | 35.570286 | 8 |
TACATGG | 21080 | 0.0 | 34.31865 | 2 |
ACATGGG | 21185 | 0.0 | 33.57907 | 3 |
GCAGAGT | 19055 | 0.0 | 32.27584 | 9 |
CATGGGT | 6720 | 0.0 | 31.686897 | 4 |
CATGGGG | 10780 | 0.0 | 27.97404 | 4 |
AGAGTAC | 17745 | 0.0 | 26.26207 | 10-11 |
CAGAGTA | 18625 | 0.0 | 23.280764 | 10-11 |
ATGGGGG | 4880 | 0.0 | 23.15793 | 5 |
ATGGGTG | 3770 | 0.0 | 22.71889 | 5 |
ATGGGTA | 3330 | 0.0 | 22.32707 | 5 |