ERR1142833_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1142833_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	94749
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	400	0.42216804398991015	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	362	0.3820620798108687	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	283	0.2986838911228615	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	222	0.23430326441440016	No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT	216	0.2279707437545515	No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC	189	0.19947440078523257	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	171	0.1804768388056866	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG	169	0.17836599858573704	No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC	166	0.17519973825581273	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT	145	0.15303591594634244	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	144	0.15198049583636766	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC	138	0.145647975176519	No Hit
GTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTAGGGCTGAA	138	0.145647975176519	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	138	0.145647975176519	No Hit
GTACATGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	136	0.14353713495656947	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	130	0.13720461429672082	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	130	0.13720461429672082	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	128	0.13509377407677126	No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	125	0.13192751374684694	No Hit
ATATAAGCCTTGGTAGGGATAGATAGCCACCTATATAGTATAGCTTCCCA	125	0.13192751374684694	No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC	124	0.13087209363687213	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	120	0.12665041319697307	No Hit
ATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGAGTAGG	116	0.12242873275707396	No Hit
GGTTTATACTTCAATATAAGCCTTGGTAGGGATAGATAGCCACCTATATA	115	0.12137331264709918	No Hit
AATTAGGGCTGAAAGCCCTAACTTAATGGACGGGAGGTATCCCAATAGGA	114	0.12031789253712441	No Hit
GAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAAGCTAT	114	0.12031789253712441	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	112	0.11820705231717485	No Hit
GGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTAGGGCTGA	105	0.11081911154735144	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC	104	0.10976369143737665	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC	104	0.10976369143737665	No Hit
GAATATATCCCATTTTTAGTTATAATGATGCCTTATGTGATAGATGCCTC	104	0.10976369143737665	No Hit
TATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTAGGGCTGAAA	103	0.10870827132740186	No Hit
ATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGGAGGT	101	0.10659743110745233	No Hit
GTACATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTA	98	0.103431170777528	No Hit
GGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAGCTTTCTTAGCTG	97	0.10237575066755322	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTCAAG	20	8.4109977E-4	89.37348	3
GTACAAA	25	0.0020226804	71.650505	1
CGTTAAC	35	8.952397E-5	68.23857	1
CAGTTCT	40	1.7654216E-4	59.487846	7
TGTCACG	15	0.004234516	59.487843	80-81
TAACAGT	45	3.1345565E-4	52.962063	4
TTAACAG	45	3.1345565E-4	52.962063	3
ATTGCCT	35	0.0077643106	51.016544	9
AACAGTT	50	5.271572E-4	47.665855	5
AGTTCTT	50	5.2991766E-4	47.61544	8
TACAAAA	85	3.414345E-6	42.05811	2
GCTTTTG	70	7.982271E-8	34.01103	22-23
GTAAAAA	110	1.9722733E-5	32.568413	1
GTTCTTG	75	0.0038863404	31.74363	9
TTGTGAT	85	1.2511009E-8	31.493563	26-27
CTGAATC	80	0.0053291935	29.759653	9
TTCACCT	125	4.8427773E-5	28.554165	7
GCTATTG	170	4.3403634E-7	28.009085	8
TGGGGGA	260	3.6379788E-11	27.455929	6
CTATTGA	175	5.592028E-7	27.208824	9

Summary

Basic Statistics

Per base sequence quality

Per sequence quality scores

Per base sequence content

Per sequence GC content

Per base N content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

Kmer Content