##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1142662_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 581404 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.89268219688891 27.0 14.0 33.0 14.0 33.0 2 29.647317527915185 33.0 27.0 33.0 27.0 33.0 3 29.132683985662293 33.0 27.0 33.0 14.0 33.0 4 30.30804053635682 33.0 33.0 33.0 27.0 33.0 5 31.320957544151742 33.0 33.0 33.0 27.0 33.0 6 33.07735412897056 37.0 33.0 37.0 27.0 37.0 7 35.18236888635097 37.0 37.0 37.0 33.0 37.0 8 34.819414727108864 37.0 37.0 37.0 27.0 37.0 9 35.60739004203617 37.0 37.0 37.0 33.0 37.0 10-11 35.771344022400946 37.0 37.0 37.0 33.0 37.0 12-13 35.8558498049549 37.0 37.0 37.0 33.0 37.0 14-15 35.952619005029206 37.0 37.0 37.0 33.0 37.0 16-17 35.98160315374507 37.0 37.0 37.0 33.0 37.0 18-19 36.02625454933231 37.0 37.0 37.0 35.0 37.0 20-21 36.06215299516343 37.0 37.0 37.0 37.0 37.0 22-23 36.06861923894572 37.0 37.0 37.0 37.0 37.0 24-25 36.06739203720649 37.0 37.0 37.0 37.0 37.0 26-27 35.966082964685484 37.0 37.0 37.0 35.0 37.0 28-29 35.93947582059979 37.0 37.0 37.0 33.0 37.0 30-31 35.972881163528285 37.0 37.0 37.0 35.0 37.0 32-33 35.92598348136579 37.0 37.0 37.0 33.0 37.0 34-35 35.86093146933973 37.0 37.0 37.0 33.0 37.0 36-37 35.7948715523113 37.0 37.0 37.0 33.0 37.0 38-39 35.74162458462618 37.0 37.0 37.0 33.0 37.0 40-41 35.671048014805535 37.0 37.0 37.0 33.0 37.0 42-43 35.59565465665871 37.0 37.0 37.0 33.0 37.0 44-45 35.51392663277171 37.0 37.0 37.0 33.0 37.0 46-47 35.39366000233916 37.0 37.0 37.0 33.0 37.0 48-49 35.27547454093883 37.0 37.0 37.0 33.0 37.0 50-51 35.191483030732506 37.0 37.0 37.0 33.0 37.0 52-53 35.130828133277376 37.0 37.0 37.0 33.0 37.0 54-55 35.06864417857462 37.0 37.0 37.0 33.0 37.0 56-57 35.02998431383341 37.0 37.0 37.0 33.0 37.0 58-59 34.9791496102538 37.0 37.0 37.0 27.0 37.0 60-61 34.93656476391631 37.0 37.0 37.0 27.0 37.0 62-63 34.91541337864892 37.0 37.0 37.0 27.0 37.0 64-65 34.89660287854917 37.0 37.0 37.0 27.0 37.0 66-67 34.870178911737796 37.0 37.0 37.0 27.0 37.0 68-69 34.823054192953606 37.0 37.0 37.0 27.0 37.0 70-71 34.764861438861786 37.0 37.0 37.0 27.0 37.0 72-73 34.7307466064905 37.0 37.0 37.0 27.0 37.0 74-75 34.62061578523712 37.0 37.0 37.0 27.0 37.0 76-77 34.56550006535903 37.0 37.0 37.0 27.0 37.0 78-79 34.558773245454105 37.0 37.0 37.0 27.0 37.0 80-81 34.51951740958094 37.0 37.0 37.0 27.0 37.0 82-83 34.4852881989116 37.0 37.0 37.0 27.0 37.0 84-85 34.362082992205075 37.0 37.0 37.0 27.0 37.0 86-87 34.23563821370338 37.0 37.0 37.0 27.0 37.0 88-89 34.17732506140309 37.0 37.0 37.0 27.0 37.0 90-91 34.15040918191137 37.0 37.0 37.0 27.0 37.0 92-93 34.037792137652986 37.0 37.0 37.0 27.0 37.0 94-95 34.079514416825475 37.0 37.0 37.0 27.0 37.0 96-97 34.07474750775708 37.0 37.0 37.0 27.0 37.0 98-99 34.0072281924445 37.0 37.0 37.0 27.0 37.0 100-101 33.917846282447314 37.0 37.0 37.0 22.0 37.0 102-103 33.8142745835942 37.0 33.0 37.0 22.0 37.0 104-105 33.723398015837525 37.0 33.0 37.0 22.0 37.0 106-107 33.62141901328508 37.0 33.0 37.0 22.0 37.0 108-109 33.51786709413764 37.0 33.0 37.0 22.0 37.0 110-111 33.46561513164684 37.0 33.0 37.0 22.0 37.0 112-113 33.382000295835596 37.0 33.0 37.0 22.0 37.0 114-115 33.295894077096136 37.0 33.0 37.0 18.0 37.0 116-117 33.193900454761234 37.0 33.0 37.0 14.0 37.0 118-119 33.08287610680353 37.0 33.0 37.0 14.0 37.0 120-121 33.013482879374756 37.0 33.0 37.0 14.0 37.0 122-123 32.89053222888043 37.0 33.0 37.0 14.0 37.0 124-125 31.62343740325144 37.0 27.5 37.0 14.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 2.0 16 2.0 17 10.0 18 73.0 19 292.0 20 1206.0 21 2879.0 22 4606.0 23 6274.0 24 5992.0 25 4840.0 26 4963.0 27 5819.0 28 7266.0 29 9591.0 30 12620.0 31 17327.0 32 24341.0 33 35649.0 34 58103.0 35 119280.0 36 260269.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 44.39618755258978 16.060253050422524 13.14051990109249 26.403039495895204 2 18.231040722114056 20.53150649118341 37.382095754415175 23.855357032287362 3 20.51809069081052 24.450640174474202 28.80733534685004 26.22393378786524 4 14.483169045698393 17.439314481105058 34.91474873537794 33.162767737818605 5 16.340702362768166 33.77936258927466 32.2985041764714 17.58143087148578 6 29.99661162127902 34.11426576241101 18.647950890868405 17.241171725441564 7 26.49087381579762 31.789426973326634 22.35829130862533 19.361407902250413 8 26.198822161526238 31.26431878693645 21.300679045895798 21.23618000564152 9 27.10370069693363 15.891359536570096 20.647776761081797 36.35716300541448 10-11 25.828081678144628 24.780445266974425 26.426374775543337 22.965098279337603 12-13 27.091488878645485 23.9036883131179 26.367637649551774 22.63718515868484 14-15 25.172427434279776 24.135626861872296 25.094598592372947 25.59734711147498 16-17 23.92054406230435 26.209400004127936 25.969979566704048 23.90007636686366 18-19 23.64887410475332 24.821724652737167 28.411913230731127 23.117488011778384 20-21 25.397122981490384 23.62252870439568 28.2300238819884 22.75032443212553 22-23 25.097350551423798 23.36473433275313 28.297190937798845 23.24072417802423 24-25 23.97463725739761 24.28225468005036 28.277497230841202 23.465610831710823 26-27 23.67940365047368 24.412284745202992 28.412945215375196 23.49536638894813 28-29 23.407389698041293 24.34890368831312 28.768033931655097 23.475672681990492 30-31 23.815195629889025 24.097873423643456 28.665867451892318 23.4210634945752 32-33 23.583879354011454 24.22379638237472 28.351996505008998 23.840327758604822 34-35 23.950340813514895 24.25993673923251 28.455391527047503 23.33433092020509 36-37 23.767834260700557 24.365534619320773 28.184796910878145 23.681834209100526 38-39 23.668594781190823 24.38419874887555 28.075480265636045 23.87172620429758 40-41 23.567136440139357 24.48177137308763 28.375011502813567 23.576080683959443 42-43 23.8799167177649 24.3501637866757 28.164256234772655 23.605663260786745 44-45 23.69573892074675 24.56088902342957 27.798063990147952 23.94530806567573 46-47 23.767720097282087 24.51745952026309 27.72049287756148 23.994327504893345 48-49 23.865074887685672 24.811060811415125 27.533092307586465 23.790771993312738 50-51 23.7279069287449 25.071808931483098 27.271570199035438 23.92871394073656 52-53 23.86086095038906 24.75352766750831 27.289887926467653 24.095723455634978 54-55 23.818783028968742 24.71523600259717 27.321519945304672 24.144461023129416 56-57 23.900420361745017 24.6861046707625 26.964382769984386 24.4490921975081 58-59 23.747739287253065 24.765801769354407 27.24370633911164 24.242752604280884 60-61 23.883736609999243 24.729190029652358 27.453543491272846 23.93352986907555 62-63 23.487970498998976 24.778639293847306 27.43565575744233 24.29773444971139 64-65 23.511362150931195 24.460100033711498 27.706895721391668 24.321642093965643 66-67 23.679145654312663 24.661251040584517 27.47117322894235 24.188430076160465 68-69 23.673727734931305 24.597525988813288 27.379412594340597 24.349333681914814 70-71 23.478859128221224 24.50844731874492 27.707033483976108 24.305660069057744 72-73 23.668330170011018 24.78210055495022 27.503446401681447 24.046122873357316 74-75 23.587006581071137 24.718227716252102 27.653066934098902 24.04169876857786 76-77 23.617707598895667 24.60031525400675 27.503114230937765 24.278862916159824 78-79 23.644114513145414 24.79555831135336 27.472198596320435 24.08812857918079 80-81 23.51170614581255 24.848556253482947 27.694941899264542 23.944795701439965 82-83 23.514108998593056 24.817940082765453 27.598890268695325 24.069060649946163 84-85 23.391520338187753 25.015906361253048 27.29299129993069 24.299582000628504 86-87 23.307568940362138 24.99941829751626 27.48919110607065 24.203821656050955 88-89 23.41321092754458 24.676469016034723 27.40697568150584 24.50334437491486 90-91 23.677956312196415 24.752376386171466 27.254995295861477 24.31467200577064 92-93 23.58150377053897 24.951629937579792 27.15037877678444 24.3164875150968 94-95 23.197098019250216 24.986756014833265 27.294133430570554 24.52201253534596 96-97 23.41237762382096 24.736671918321857 27.237600704501517 24.61334975335567 98-99 23.13666572641399 24.88011778384738 27.078417073153954 24.90479941658468 100-101 23.37247421758364 25.25412621860187 26.754889887238477 24.61850967657601 102-103 23.650356422002965 25.056092713580156 26.958386043427673 24.33516482098921 104-105 23.398752956353473 25.22193076757687 26.728101483551924 24.651214792517738 106-107 23.464443408575278 25.226491264584112 26.72648524431127 24.58258008252934 108-109 23.502147591205972 25.21884444627926 26.549714543243386 24.729293419271382 110-111 23.29819540039097 25.456095071085727 26.50808298595314 24.737626542570162 112-113 23.38113687867933 25.44083182469071 26.447157373284767 24.730873923345186 114-115 23.31229725034487 25.487115184164626 26.53393121906079 24.666656346429715 116-117 23.284465699633902 25.63981283125831 26.422061900531563 24.653659568576224 118-119 23.138406286926145 25.460829691243674 26.522152677086396 24.87861134474378 120-121 23.096934317617354 25.435755515957926 26.707504592331667 24.759805574093058 122-123 23.141825649634335 25.632176593212293 26.497667714704402 24.728330042448967 124-125 23.122039483868303 25.496902315437513 26.486492994520145 24.89456520617404 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 241.0 1 231.5 2 370.5 3 486.0 4 361.5 5 304.5 6 451.5 7 933.0 8 1497.0 9 1748.5 10 1574.5 11 1219.5 12 1079.0 13 1043.0 14 988.5 15 941.5 16 907.5 17 879.5 18 886.0 19 855.0 20 820.5 21 834.5 22 878.5 23 945.0 24 1048.0 25 1196.0 26 1411.0 27 1727.5 28 2092.0 29 2663.0 30 3476.0 31 4267.0 32 5245.5 33 6209.0 34 7158.5 35 8204.0 36 9170.5 37 10170.0 38 11038.5 39 11775.0 40 12259.5 41 12765.5 42 13469.5 43 14635.0 44 16183.5 45 17636.0 46 19318.0 47 20725.5 48 22291.5 49 23862.0 50 24109.5 51 23428.0 52 23377.0 53 24040.5 54 24104.0 55 23463.5 56 22540.0 57 20805.5 58 19240.0 59 17597.0 60 15155.0 61 12686.5 62 10346.0 63 8159.0 64 6205.0 65 4989.5 66 3965.0 67 2917.5 68 2348.0 69 2010.0 70 1690.5 71 1500.5 72 1336.5 73 1273.0 74 1019.0 75 765.5 76 606.0 77 444.5 78 326.0 79 205.0 80 132.5 81 94.5 82 64.5 83 45.0 84 28.0 85 16.5 86 10.5 87 3.0 88 1.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04385934737291109 2 0.0 3 0.0 4 8.599872033904136E-4 5 0.0089438669152603 6 8.599872033904136E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 6.019910423732895E-4 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 8.599872033904136E-5 34-35 1.7199744067808272E-4 36-37 0.0015479769661027444 38-39 0.001203982084746579 40-41 0.004213937296613026 42-43 0.0012899808050856204 44-45 3.4399488135616543E-4 46-47 3.4399488135616543E-4 48-49 0.0 50-51 0.0 52-53 0.0 54-55 2.5799616101712403E-4 56-57 0.0 58-59 9.459859237294549E-4 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0011179833644075375 72-73 8.599872033904136E-5 74-75 0.09829653734752426 76-77 0.10362845800854484 78-79 6.019910423732895E-4 80-81 0.0 82-83 3.4399488135616543E-4 84-85 0.11377630700855172 86-87 0.2082029019408191 88-89 0.253696225000172 90-91 0.09158863716107904 92-93 0.16907348418655532 94-95 0.0013759795254246617 96-97 0.0 98-99 0.0 100-101 0.0 102-103 8.599872033904136E-5 104-105 0.004987925779664399 106-107 0.006019910423732895 108-109 0.009459859237294548 110-111 0.0049019270593253575 112-113 0.0054179193813596056 114-115 0.0037839436949178196 116-117 6.019910423732895E-4 118-119 0.001203982084746579 120-121 0.0 122-123 0.0 124-125 3.4399488135616543E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 581404.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 78.92195690927677 #Duplication Level Percentage of deduplicated Percentage of total 1 87.75779751803272 69.26017114171215 2 8.591454177728174 13.561087528053777 3 1.8710939814601462 4.430111957340143 4 0.6923454918326809 2.185650442910035 5 0.35897327070209084 1.416543650096628 6 0.1848984289994187 0.8755527507651054 7 0.134277253610563 0.7418196536344217 8 0.08198215313054755 0.5176153565359042 9 0.061499645741606795 0.436830515203939 >10 0.24442898055099163 3.190031345194032 >50 0.014166068030600274 0.7398854921858998 >100 0.005818203362527619 0.8970059521019371 >500 5.059307271759294E-4 0.258540553743944 >1k 7.588960907638941E-4 1.4891536605220685 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3010 0.517712296441029 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2822 0.4853767775935494 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1627 0.2798398359832406 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 747 0.1284820881865278 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.7199744067808272E-4 0.0 12-13 0.0 0.0 0.0 1.7199744067808272E-4 0.0 14-15 0.0 0.0 0.0 1.7199744067808272E-4 0.0 16-17 0.0 0.0 0.0 1.7199744067808272E-4 0.0 18-19 0.0 0.0 0.0 1.7199744067808272E-4 1.7199744067808272E-4 20-21 0.0 0.0 0.0 4.299936016952068E-4 1.7199744067808272E-4 22-23 0.0 0.0 0.0 0.0017199744067808273 2.579961610171241E-4 24-25 0.0 0.0 0.0 0.004557932177969192 3.4399488135616543E-4 26-27 0.0 0.0 0.0 0.007309891228818515 3.4399488135616543E-4 28-29 0.0 0.0 0.0 0.012211818288143873 3.4399488135616543E-4 30-31 0.0 0.0 0.0 0.02339165193221925 3.4399488135616543E-4 32-33 0.0 0.0 0.0 0.04772928978816795 3.4399488135616543E-4 34-35 0.0 0.0 0.0 0.07851683166954476 3.4399488135616543E-4 36-37 0.0 0.0 0.0 0.12762210098313737 3.4399488135616543E-4 38-39 0.0 0.0 0.0 0.19831304910182934 3.4399488135616543E-4 40-41 0.0 0.0 0.0 0.27209995115272684 3.4399488135616543E-4 42-43 0.0 0.0 0.0 0.33677098884768597 3.4399488135616543E-4 44-45 0.0 0.0 0.0 0.40728993952569986 3.4399488135616543E-4 46-47 0.0 0.0 0.0 0.499136572847796 3.4399488135616543E-4 48-49 0.0 0.0 0.0 0.5995830782037963 3.4399488135616543E-4 50-51 0.0 0.0 0.0 0.6949556590597932 3.4399488135616543E-4 52-53 0.0 0.0 0.0 0.7843943282123962 3.4399488135616543E-4 54-55 0.0 0.0 0.0 0.8599872033904136 3.4399488135616543E-4 56-57 0.0 0.0 0.0 0.9573377548142084 3.4399488135616543E-4 58-59 0.0 0.0 0.0 1.0703400733397088 5.159923220342482E-4 60-61 0.0 0.0 0.0 1.176892487839781 0.0010319846440684963 62-63 0.0 0.0 0.0 1.2761350111110348 0.0010319846440684963 64-65 0.0 0.0 0.0 1.3792474767975453 0.0010319846440684963 66-67 0.0 0.0 0.0 1.486659878501008 0.0010319846440684963 68-69 0.0 0.0 0.0 1.6109280293909225 0.0010319846440684963 70-71 0.0 0.0 0.0 1.7567818590859368 0.0010319846440684963 72-73 0.0 0.0 0.0 1.8866399267978893 0.001203982084746579 74-75 0.0 0.0 0.0 2.0075541275945814 0.001203982084746579 76-77 0.0 0.0 0.0 2.1381001850692463 0.001203982084746579 78-79 0.0 0.0 0.0 2.287909955899856 0.001203982084746579 80-81 0.0 0.0 0.0 2.45173751814573 0.001203982084746579 82-83 0.0 0.0 0.0 2.614791091908552 0.0013759795254246617 84-85 0.0 0.0 0.0 2.7780166631120533 0.0013759795254246617 86-87 0.0 0.0 0.0 2.9499281050697967 0.001461978245763703 88-89 0.0 0.0 0.0 3.1290634395360195 0.0015479769661027444 90-91 0.0 0.0 0.0 3.3235065462225926 0.0015479769661027444 92-93 0.0 0.0 0.0 3.5360953829007027 0.0015479769661027444 94-95 0.0 0.0 0.0 3.751436178629662 0.0015479769661027444 96-97 0.0 0.0 0.0 3.9540491637484436 0.0015479769661027444 98-99 0.0 0.0 0.0 4.176699850706221 0.0015479769661027444 100-101 0.0 0.0 0.0 4.419560236943674 0.0015479769661027444 102-103 0.0 0.0 0.0 4.664570591189603 0.0016339756864417858 104-105 0.0 0.0 0.0 4.928844658791477 0.001719974406780827 106-107 0.0 0.0 0.0 5.197418662410303 0.001719974406780827 108-109 0.0 0.0 0.0 5.460832742808787 0.001719974406780827 110-111 0.0 0.0 0.0 5.741876560876774 0.001719974406780827 112-113 0.0 0.0 0.0 6.042270091021045 0.001719974406780827 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1915 0.0 66.199974 1 GTATCAA 3145 0.0 44.47277 1 ATCAACG 4140 0.0 33.614468 3 TCAACGC 4255 0.0 33.125275 4 TATCAAC 4220 0.0 33.118153 2 CAACGCA 4300 0.0 32.778614 5 AACGCAG 4490 0.0 31.524 6 GTGGTAT 895 0.0 30.59016 1 TAAGACG 40 0.005374692 29.735874 50-51 ACGCAGA 4955 0.0 28.44562 7 CGCAGAG 5155 0.0 27.457375 8 TGGTATC 980 0.0 26.701601 2 GCAGAGT 5515 0.0 25.665052 9 CATGGGT 1150 0.0 25.340136 4 CAGAGTA 5400 0.0 25.000162 10-11 GAGTACT 2565 0.0 24.57702 12-13 ATGGGTA 510 0.0 22.156141 5 GTACATG 4275 0.0 22.136452 1 AGAGTAC 5275 0.0 21.928446 10-11 TACATGG 4405 0.0 21.736553 2 >>END_MODULE