##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1142642_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 435563 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 23.465491788788302 27.0 14.0 33.0 14.0 33.0 2 25.545718988986668 27.0 27.0 33.0 14.0 33.0 3 24.923875535800793 27.0 14.0 33.0 14.0 33.0 4 30.27234636550855 33.0 27.0 33.0 27.0 33.0 5 31.972692813668747 33.0 33.0 33.0 33.0 33.0 6 35.616657062238986 37.0 37.0 37.0 33.0 37.0 7 35.65634592469976 37.0 37.0 37.0 33.0 37.0 8 35.990889951625824 37.0 37.0 37.0 33.0 37.0 9 36.152159389112484 37.0 37.0 37.0 37.0 37.0 10-11 36.125844022563896 37.0 37.0 37.0 37.0 37.0 12-13 36.17438235111798 37.0 37.0 37.0 37.0 37.0 14-15 36.173819860731975 37.0 37.0 37.0 37.0 37.0 16-17 36.16530903680983 37.0 37.0 37.0 37.0 37.0 18-19 36.16790338022284 37.0 37.0 37.0 37.0 37.0 20-21 36.17948609041631 37.0 37.0 37.0 37.0 37.0 22-23 36.17257319836625 37.0 37.0 37.0 37.0 37.0 24-25 36.15196423938673 37.0 37.0 37.0 37.0 37.0 26-27 36.042020327713786 37.0 37.0 37.0 37.0 37.0 28-29 36.00792422680531 37.0 37.0 37.0 37.0 37.0 30-31 36.02594458206964 37.0 37.0 37.0 37.0 37.0 32-33 35.979591930444045 37.0 37.0 37.0 37.0 37.0 34-35 35.89364110358318 37.0 37.0 37.0 33.0 37.0 36-37 35.81256672398712 37.0 37.0 37.0 33.0 37.0 38-39 35.75331697136809 37.0 37.0 37.0 33.0 37.0 40-41 35.67389562474315 37.0 37.0 37.0 33.0 37.0 42-43 35.58530453688674 37.0 37.0 37.0 33.0 37.0 44-45 35.50647437913689 37.0 37.0 37.0 33.0 37.0 46-47 35.37244784336594 37.0 37.0 37.0 33.0 37.0 48-49 35.240815909523995 37.0 37.0 37.0 33.0 37.0 50-51 35.14359920378912 37.0 37.0 37.0 33.0 37.0 52-53 35.08632620309806 37.0 37.0 37.0 33.0 37.0 54-55 35.01463852531092 37.0 37.0 37.0 33.0 37.0 56-57 34.98098782495299 37.0 37.0 37.0 30.0 37.0 58-59 34.92847188581216 37.0 37.0 37.0 27.0 37.0 60-61 34.9134063269837 37.0 37.0 37.0 27.0 37.0 62-63 34.89488661800934 37.0 37.0 37.0 27.0 37.0 64-65 34.87822771906705 37.0 37.0 37.0 27.0 37.0 66-67 34.844919104698974 37.0 37.0 37.0 27.0 37.0 68-69 34.79217472558504 37.0 37.0 37.0 27.0 37.0 70-71 34.751236904879434 37.0 37.0 37.0 27.0 37.0 72-73 34.73156810840223 37.0 37.0 37.0 27.0 37.0 74-75 34.639447106388744 37.0 37.0 37.0 27.0 37.0 76-77 34.58637097274103 37.0 37.0 37.0 27.0 37.0 78-79 34.5562777370897 37.0 37.0 37.0 27.0 37.0 80-81 34.52401259978465 37.0 37.0 37.0 27.0 37.0 82-83 34.499081648349375 37.0 37.0 37.0 27.0 37.0 84-85 34.38770969985972 37.0 37.0 37.0 27.0 37.0 86-87 34.278044737500664 37.0 37.0 37.0 27.0 37.0 88-89 34.22290460851817 37.0 37.0 37.0 27.0 37.0 90-91 34.17513654741106 37.0 37.0 37.0 27.0 37.0 92-93 34.074866322437856 37.0 37.0 37.0 27.0 37.0 94-95 34.10182109132319 37.0 37.0 37.0 27.0 37.0 96-97 34.100538842831 37.0 37.0 37.0 27.0 37.0 98-99 34.031366300627 37.0 37.0 37.0 24.5 37.0 100-101 33.94779515248081 37.0 37.0 37.0 22.0 37.0 102-103 33.87033793044864 37.0 37.0 37.0 22.0 37.0 104-105 33.76484458046252 37.0 35.0 37.0 22.0 37.0 106-107 33.66886764945599 37.0 33.0 37.0 22.0 37.0 108-109 33.56661952461527 37.0 33.0 37.0 22.0 37.0 110-111 33.50641009452134 37.0 33.0 37.0 22.0 37.0 112-113 33.43914772375064 37.0 33.0 37.0 22.0 37.0 114-115 33.35134297449508 37.0 33.0 37.0 18.0 37.0 116-117 33.260406646110894 37.0 33.0 37.0 14.0 37.0 118-119 33.15855341247994 37.0 33.0 37.0 14.0 37.0 120-121 33.079782947587375 37.0 33.0 37.0 14.0 37.0 122-123 32.96217883520869 37.0 33.0 37.0 14.0 37.0 124-125 31.707654231420022 37.0 30.0 37.0 14.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 174.0 16 91.0 17 16.0 18 80.0 19 295.0 20 1061.0 21 2702.0 22 4207.0 23 5450.0 24 4576.0 25 3469.0 26 3240.0 27 3923.0 28 5080.0 29 6328.0 30 8589.0 31 11585.0 32 16112.0 33 24344.0 34 40917.0 35 90545.0 36 202777.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 55.30750892278859 11.352267559634544 11.716528633308988 21.62369488426787 2 18.741490897987205 19.511528757034 35.516331736166755 26.23064860881204 3 22.531757748018084 24.040150334165205 28.548108999157414 24.879982918659298 4 15.21830466915082 17.425802585630944 34.87134982241293 32.4845429228053 5 16.055369200709908 35.093181249411664 31.682543181134616 17.168906368743816 6 30.115483515474335 34.00289282762421 18.5708053999449 17.310818256956562 7 26.44393577966907 31.996519447244143 22.562292940401274 18.997251832685514 8 26.30664220790104 31.014342356903597 21.363614448426517 21.315400986768847 9 27.065889435053027 15.783709819245436 21.16157708528961 35.98882366041193 10-11 25.710172810821856 24.71135059681378 26.47217509292571 23.106301499438658 12-13 26.78854723656509 23.79345812201679 26.640463032902247 22.777531608515876 14-15 25.083742191141123 24.054269990793525 25.33031960933321 25.531668208732146 16-17 23.77026974283858 26.168774666351364 26.323172537612237 23.737783053197813 18-19 23.58855090997169 24.743378110629234 28.73545273588436 22.932618243514717 20-21 24.945587289925612 23.66665901368353 28.591927633391496 22.795826062999357 22-23 24.719845349582034 23.529776404331866 28.575429960763426 23.174948285322674 24-25 23.731125003730806 24.39176422239722 28.571412172291954 23.305698601580023 26-27 23.496715744909462 24.458803892892647 28.60470241962701 23.43977794257088 28-29 23.250138326717376 24.29476332930024 29.13596884951201 23.319129494470374 30-31 23.69450573166224 24.11166696895742 28.995346253010474 23.19848104636987 32-33 23.3027139587155 24.213604002176496 28.644650716429084 23.839031322678924 34-35 23.55342395933539 24.229789950018713 28.7905538349217 23.4262322557242 36-37 23.55567290197046 24.407569609064243 28.42965624515707 23.607101243808224 38-39 23.67862484918823 24.124947337849363 28.484397654051858 23.71203015891055 40-41 23.34183980962024 24.458472668496533 28.496465966633032 23.703221555250195 42-43 23.730025714023327 24.32317017173294 28.36658554504546 23.580218569198273 44-45 23.543031761264757 24.510287857985773 27.908655943355942 24.038024437393528 46-47 23.60533792509686 24.446089826373942 27.901621466494475 24.046950782034727 48-49 23.821467847360772 24.855187424092495 27.627117087539578 23.696227641007155 50-51 23.592109522617854 24.99822069367692 27.403383666656715 24.006286117048507 52-53 23.591420758879885 24.78699981403379 27.33393332307841 24.287646104007916 54-55 23.691231099131695 24.816558836629458 27.342261262460916 24.14994880177793 56-57 23.792769358278825 24.733391036428714 26.952013830375858 24.521825774916604 58-59 23.55226937214305 24.71800735143872 27.382961284412517 24.34676199200571 60-61 23.634468492502805 24.729602835869898 27.643532623294448 23.992396048332846 62-63 23.257370345966024 24.94174206716365 27.507386991089692 24.293500595780635 64-65 23.43885959092026 24.526187945257057 27.62252532928646 24.412427134536223 66-67 23.64987803128139 24.68291003013345 27.53141053235758 24.135801406227582 68-69 23.677286638213072 24.50070368695229 27.418880850760967 24.40312882407367 70-71 23.256038203691798 24.553678023693635 27.90625860960602 24.28402516300854 72-73 23.656306500215237 24.67108623905869 27.795322140909747 23.87728511981633 74-75 23.619025735294116 24.517348345588236 27.919462316176467 23.944163602941178 76-77 23.42715070101645 24.65018112799137 27.894400025735916 24.028268145256263 78-79 23.54144496905704 24.786165839569566 27.723192812922232 23.949196378451166 80-81 23.215814933775366 24.85656495156843 27.99468733570115 23.932932778955056 82-83 23.390152710926014 24.921279773350033 27.82959467262373 23.85897284310023 84-85 23.38598573593673 24.992560028220186 27.472857029595577 24.14859720624751 86-87 23.11748884286639 25.0016386411123 27.711088598162654 24.16978391785866 88-89 23.372261027212573 24.59266263585581 27.491188352981233 24.54388798395038 90-91 23.656306793769833 24.72549438581738 27.459866693318812 24.158332127093974 92-93 23.498906728162726 24.956257630485617 27.268452842161896 24.27638279918976 94-95 22.909896144834736 25.060812726648656 27.48172748321982 24.547563645296787 96-97 23.198136664500886 24.908337025872264 27.256103020688165 24.637423288938685 98-99 23.0184841228479 25.00453436127495 27.160135273198136 24.816846242679016 100-101 23.16622394464176 25.3104602548885 26.895420409906258 24.627895390563477 102-103 23.523260152102164 25.092954512842592 26.905093987659633 24.47869134739561 104-105 23.258040519442353 25.262889627684 26.86169480006612 24.617375052807525 106-107 23.29391127856492 25.19843046495983 26.83741903784471 24.670239218630538 108-109 23.417599448940933 25.429653866023767 26.488835313701852 24.663911371333448 110-111 23.148045042262996 25.64226781755794 26.413023638119004 24.796663502060056 112-113 23.07618130325924 25.64467858196541 26.389834380485205 24.88930573429014 114-115 23.169291135200787 25.610236288266403 26.53412880540284 24.686343771129966 116-117 23.317285064548937 25.70753579865966 26.25969726398828 24.71548187280312 118-119 22.93007376727378 25.542349027341878 26.540491644071185 24.98708556131316 120-121 23.042246471807754 25.448901766219812 26.78659573930752 24.72225602266492 122-123 23.016188243721345 25.652087068919993 26.62083326637019 24.710891420988467 124-125 22.98708335437894 25.58992749597072 26.57118848751728 24.851800662133062 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 96.0 1 98.5 2 201.5 3 313.0 4 272.0 5 247.5 6 321.0 7 572.0 8 943.5 9 1195.5 10 1104.5 11 884.5 12 845.5 13 822.5 14 800.0 15 789.0 16 785.5 17 794.0 18 790.0 19 790.0 20 795.5 21 788.5 22 790.5 23 824.0 24 859.5 25 951.5 26 1134.5 27 1338.5 28 1596.0 29 2024.5 30 2628.5 31 3278.5 32 4064.5 33 4703.0 34 5372.0 35 6124.0 36 6851.0 37 7797.5 38 8634.0 39 9015.0 40 9080.5 41 9319.5 42 9867.5 43 10944.0 44 12082.0 45 13055.0 46 14418.0 47 15739.5 48 16938.0 49 18219.0 50 18929.5 51 18296.5 52 17510.0 53 17559.5 54 17421.0 55 17004.0 56 16404.5 57 15115.5 58 13996.0 59 12732.0 60 11255.0 61 9539.5 62 7594.5 63 5990.0 64 4581.5 65 3698.0 66 2890.0 67 2204.5 68 1850.0 69 1541.5 70 1266.0 71 1147.5 72 1027.5 73 973.0 74 814.0 75 657.0 76 530.5 77 366.5 78 267.0 79 168.0 80 101.5 81 77.5 82 68.0 83 52.5 84 31.0 85 18.5 86 12.0 87 4.0 88 3.0 89 4.5 90 3.0 91 1.0 92 1.5 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0369636539375475 2 0.0 3 0.0 4 4.5917582531114905E-4 5 0.003214230777178043 6 6.887637379667235E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 6.887637379667235E-4 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0012627335196056598 38-39 8.035576942945108E-4 40-41 0.0028698489081946813 42-43 6.887637379667235E-4 44-45 2.2958791265557452E-4 46-47 1.1479395632778726E-4 48-49 0.0 50-51 0.0 52-53 0.0 54-55 2.2958791265557452E-4 56-57 0.0 58-59 4.5917582531114905E-4 60-61 0.0 62-63 0.0 64-65 0.0 66-67 1.1479395632778726E-4 68-69 0.0 70-71 6.887637379667235E-4 72-73 1.1479395632778726E-4 74-75 0.08334041229397354 76-77 0.08575108537685708 78-79 8.035576942945108E-4 80-81 0.0 82-83 3.4438186898336177E-4 84-85 0.09493460188308006 86-87 0.17253531636066424 88-89 0.20915458842922838 90-91 0.07484565952571728 92-93 0.14464038497301193 94-95 0.0010331456069500853 96-97 0.0 98-99 0.0 100-101 0.0 102-103 1.1479395632778726E-4 104-105 0.0043621703404559155 106-107 0.00459175825311149 108-109 0.008724340680911831 110-111 0.0037882005588169795 112-113 0.0037882005588169795 114-115 0.0033290247335058306 116-117 4.5917582531114905E-4 118-119 9.183516506222981E-4 120-121 0.0 122-123 0.0 124-125 2.2958791265557452E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 435563.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 76.98729940956832 #Duplication Level Percentage of deduplicated Percentage of total 1 88.48290768741602 68.12060106760292 2 8.10776281496246 12.483895267545588 3 1.661707007483103 3.8379100474823833 4 0.5953761611993554 1.8334561113429675 5 0.3084375557150396 1.1872887225494582 6 0.17679223764145488 0.8166454159554144 7 0.12243106093126387 0.6597945721462422 8 0.07854881202341354 0.48378087276099513 9 0.05490299607012946 0.3804150057240069 >10 0.3627621052865005 5.278226926160136 >50 0.03369329442292407 1.7379503489884085 >100 0.013010281979247135 1.5720399097964373 >500 0.0010007909214805489 0.5036383373812797 >1k 6.671939476536991E-4 1.1043573945637446 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2151 0.49384360012214074 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2149 0.4933844242968296 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 829 0.19032837959147125 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 629 0.14441079706035637 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 503 0.11548272006575398 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.295879126555745E-4 0.0 2 0.0 0.0 0.0 2.295879126555745E-4 0.0 3 0.0 0.0 0.0 2.295879126555745E-4 0.0 4 0.0 0.0 0.0 2.295879126555745E-4 0.0 5 0.0 0.0 0.0 2.295879126555745E-4 0.0 6 0.0 0.0 0.0 2.295879126555745E-4 0.0 7 0.0 0.0 0.0 2.295879126555745E-4 0.0 8 0.0 0.0 0.0 2.295879126555745E-4 0.0 9 0.0 0.0 0.0 2.295879126555745E-4 0.0 10-11 0.0 0.0 0.0 4.59175825311149E-4 0.0 12-13 0.0 0.0 0.0 6.887637379667235E-4 1.1479395632778725E-4 14-15 0.0 0.0 0.0 6.887637379667235E-4 2.295879126555745E-4 16-17 0.0 0.0 0.0 9.183516506222981E-4 2.295879126555745E-4 18-19 0.0 0.0 0.0 0.0011479395632778726 2.295879126555745E-4 20-21 0.0 0.0 0.0 0.0016071153885890215 2.295879126555745E-4 22-23 0.0 0.0 0.0 0.003099436820850256 2.295879126555745E-4 24-25 0.0 0.0 0.0 0.0057396978163893626 2.295879126555745E-4 26-27 0.0 0.0 0.0 0.009987074200517492 2.295879126555745E-4 28-29 0.0 0.0 0.0 0.02135167587696843 2.295879126555745E-4 30-31 0.0 0.0 0.0 0.03971870888941439 2.295879126555745E-4 32-33 0.0 0.0 0.0 0.07346813204978385 2.295879126555745E-4 34-35 0.0 0.0 0.0 0.10756193707913667 2.295879126555745E-4 36-37 0.0 0.0 0.0 0.15474225312985723 2.295879126555745E-4 38-39 0.0 0.0 0.0 0.22729203352901878 2.295879126555745E-4 40-41 0.0 0.0 0.0 0.3058110996572252 2.295879126555745E-4 42-43 0.0 0.0 0.0 0.38042717127028697 2.295879126555745E-4 44-45 0.0 0.0 0.0 0.4564207703592821 2.295879126555745E-4 46-47 0.0 0.0 0.0 0.554684396975868 2.295879126555745E-4 48-49 0.0 0.0 0.0 0.6450272406058366 2.295879126555745E-4 50-51 0.0 0.0 0.0 0.7336481748908883 4.59175825311149E-4 52-53 0.0 0.0 0.0 0.8224986970885957 6.887637379667235E-4 54-55 0.0 0.0 0.0 0.9056095214699136 6.887637379667235E-4 56-57 0.0 0.0 0.0 1.0043323239118107 6.887637379667235E-4 58-59 0.0 0.0 0.0 1.108335648344786 6.887637379667235E-4 60-61 0.0 0.0 0.0 1.2186526403757894 6.887637379667235E-4 62-63 0.0 0.0 0.0 1.3185233823809643 6.887637379667235E-4 64-65 0.0 0.0 0.0 1.4121952507444386 6.887637379667235E-4 66-67 0.0 0.0 0.0 1.519986775736231 6.887637379667235E-4 68-69 0.0 0.0 0.0 1.6452269820898469 6.887637379667235E-4 70-71 0.0 0.0 0.0 1.7857347846350584 6.887637379667235E-4 72-73 0.0 0.0 0.0 1.9156815431981138 6.887637379667235E-4 74-75 0.0 0.0 0.0 2.041266131420713 6.887637379667235E-4 76-77 0.0 0.0 0.0 2.1709833020711127 6.887637379667235E-4 78-79 0.0 0.0 0.0 2.315279305175141 6.887637379667235E-4 80-81 0.0 0.0 0.0 2.4808121901998104 8.035576942945108E-4 82-83 0.0 0.0 0.0 2.658054058769914 9.18351650622298E-4 84-85 0.0 0.0 0.0 2.8179620399345215 9.18351650622298E-4 86-87 0.0 0.0 0.0 2.98716833156168 9.18351650622298E-4 88-89 0.0 0.0 0.0 3.1655581396950616 0.0011479395632778724 90-91 0.0 0.0 0.0 3.3592155440200386 0.001377527475933447 92-93 0.0 0.0 0.0 3.5650411077157607 0.001377527475933447 94-95 0.0 0.0 0.0 3.7655861494204053 0.001377527475933447 96-97 0.0 0.0 0.0 3.962228196609905 0.001377527475933447 98-99 0.0 0.0 0.0 4.178959186156767 0.001377527475933447 100-101 0.0 0.0 0.0 4.409924626288275 0.001377527475933447 102-103 0.0 0.0 0.0 4.661438184602457 0.001377527475933447 104-105 0.0 0.0 0.0 4.906293693449627 0.001377527475933447 106-107 0.0 0.0 0.0 5.151608378122109 0.001377527475933447 108-109 0.0 2.295879126555745E-4 0.0 5.420800205710769 0.001377527475933447 110-111 0.0 2.295879126555745E-4 0.0 5.696994464635425 0.0014923214322612342 112-113 0.0 2.295879126555745E-4 0.0 5.992588902179478 0.0016071153885890215 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCAACG 165 0.0 61.298355 1 GCGCAGA 305 0.0 60.470802 1 TCTAACG 65 3.5253186E-5 45.74998 2 GGTATCA 2120 0.0 38.1669 1 GTATCAA 3000 0.0 35.49896 1 CTAACGC 70 0.0027928478 33.9857 3 ATCAACG 3525 0.0 29.864029 3 CAACGCA 3685 0.0 28.89015 5 TCAACGC 3745 0.0 28.586103 4 AACGCAG 3800 0.0 28.485382 6 TATCAAC 3725 0.0 28.26059 2 GTGTTAT 155 6.8226163E-6 26.86892 1 AGTACTA 90 0.009542136 26.433321 5 ACGCAGA 4115 0.0 26.160316 7 CGCAGAG 4395 0.0 24.35835 8 GCAGAGT 4670 0.0 22.923973 9 GAGTACT 1925 0.0 22.554146 12-13 GCGGTAT 185 2.6871116E-5 22.511797 1 TAACGCC 215 3.4267432E-6 22.130224 4 GTCTAAC 140 0.003153945 21.24838 1 >>END_MODULE