##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1142617_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 887094 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.193526277936723 33.0 33.0 33.0 27.0 33.0 2 31.26857807628053 33.0 33.0 33.0 27.0 33.0 3 31.375278155415323 33.0 33.0 33.0 27.0 33.0 4 31.32636563881618 33.0 33.0 33.0 27.0 33.0 5 31.33922898813429 33.0 33.0 33.0 27.0 33.0 6 34.54127071088295 37.0 37.0 37.0 27.0 37.0 7 34.654912557181085 37.0 37.0 37.0 27.0 37.0 8 34.685084106081206 37.0 37.0 37.0 27.0 37.0 9 34.57824537196735 37.0 37.0 37.0 27.0 37.0 10-11 34.630381335010725 37.0 37.0 37.0 27.0 37.0 12-13 34.638682597334665 37.0 37.0 37.0 27.0 37.0 14-15 34.601280698550546 37.0 37.0 37.0 27.0 37.0 16-17 34.59056819232235 37.0 37.0 37.0 27.0 37.0 18-19 34.60746493607216 37.0 37.0 37.0 27.0 37.0 20-21 34.6621987072396 37.0 37.0 37.0 27.0 37.0 22-23 34.708347706105556 37.0 37.0 37.0 27.0 37.0 24-25 34.76159065442896 37.0 37.0 37.0 27.0 37.0 26-27 34.733726076379725 37.0 37.0 37.0 27.0 37.0 28-29 34.7640638985271 37.0 37.0 37.0 27.0 37.0 30-31 34.823026082917934 37.0 37.0 37.0 27.0 37.0 32-33 34.83789654760375 37.0 37.0 37.0 27.0 37.0 34-35 34.831349327128805 37.0 37.0 37.0 27.0 37.0 36-37 34.78803880986682 37.0 37.0 37.0 27.0 37.0 38-39 34.76562010339378 37.0 37.0 37.0 27.0 37.0 40-41 34.7499915454281 37.0 37.0 37.0 27.0 37.0 42-43 34.74909817899794 37.0 37.0 37.0 27.0 37.0 44-45 34.76672314320692 37.0 37.0 37.0 27.0 37.0 46-47 34.75260400814345 37.0 37.0 37.0 27.0 37.0 48-49 34.734521933414044 37.0 37.0 37.0 27.0 37.0 50-51 34.712218772756884 37.0 37.0 37.0 27.0 37.0 52-53 34.67830748488886 37.0 37.0 37.0 27.0 37.0 54-55 34.635377987000254 37.0 37.0 37.0 27.0 37.0 56-57 34.568979724809324 37.0 37.0 37.0 27.0 37.0 58-59 34.519123114348645 37.0 37.0 37.0 27.0 37.0 60-61 34.48770367063693 37.0 37.0 37.0 27.0 37.0 62-63 34.53544832903841 37.0 37.0 37.0 27.0 37.0 64-65 34.47096361828622 37.0 37.0 37.0 27.0 37.0 66-67 34.44893269484406 37.0 37.0 37.0 27.0 37.0 68-69 34.41891614642867 37.0 37.0 37.0 27.0 37.0 70-71 34.3801085341576 37.0 37.0 37.0 27.0 37.0 72-73 34.34630490117169 37.0 37.0 37.0 27.0 37.0 74-75 34.27199146877332 37.0 37.0 37.0 27.0 37.0 76-77 34.216115203123906 37.0 37.0 37.0 27.0 37.0 78-79 34.144497088245444 37.0 37.0 37.0 27.0 37.0 80-81 34.06414483696203 37.0 37.0 37.0 27.0 37.0 82-83 34.03446083504116 37.0 37.0 37.0 27.0 37.0 84-85 34.008349735202806 37.0 37.0 37.0 27.0 37.0 86-87 33.93759680484819 37.0 37.0 37.0 27.0 37.0 88-89 33.88251977806185 37.0 37.0 37.0 27.0 37.0 90-91 33.80144381542429 37.0 35.0 37.0 22.0 37.0 92-93 33.66916471084237 37.0 33.0 37.0 22.0 37.0 94-95 33.59426622206891 37.0 33.0 37.0 22.0 37.0 96-97 33.50214746126115 37.0 33.0 37.0 22.0 37.0 98-99 33.44783247322155 37.0 33.0 37.0 22.0 37.0 100-101 33.312750396237604 37.0 33.0 37.0 22.0 37.0 102-103 33.24683235373027 37.0 33.0 37.0 18.0 37.0 104-105 33.123629513895935 37.0 33.0 37.0 14.0 37.0 106-107 33.02824052467946 37.0 33.0 37.0 14.0 37.0 108-109 32.89395937747297 37.0 33.0 37.0 14.0 37.0 110-111 32.804336969926524 37.0 33.0 37.0 14.0 37.0 112-113 32.7234075532018 37.0 33.0 37.0 14.0 37.0 114-115 32.54127972909297 37.0 33.0 37.0 14.0 37.0 116-117 32.35098478853425 37.0 33.0 37.0 14.0 37.0 118-119 32.245851059752404 37.0 33.0 37.0 14.0 37.0 120-121 32.1514349099419 37.0 33.0 37.0 14.0 37.0 122-123 31.950586972744716 37.0 33.0 37.0 14.0 37.0 124-125 30.27882783560705 35.0 24.5 37.0 14.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 1560.0 1 114.0 2 46.0 3 38.0 4 33.0 5 33.0 6 29.0 7 26.0 8 27.0 9 21.0 10 25.0 11 26.0 12 19.0 13 25.0 14 75.0 15 305.0 16 496.0 17 827.0 18 1794.0 19 3265.0 20 4876.0 21 6175.0 22 7354.0 23 8529.0 24 9885.0 25 11384.0 26 13297.0 27 15567.0 28 18677.0 29 22268.0 30 26038.0 31 31637.0 32 39609.0 33 52330.0 34 77131.0 35 143615.0 36 389938.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.399942754288055 19.53074354939253 12.519501441890512 24.549812254428907 2 17.625773593397163 22.477828273290914 36.190318958508364 23.706079174803556 3 20.074871896920552 26.46340525799259 28.257979024110064 25.203743820976793 4 14.981377583902633 19.063949399492095 33.594635115974576 32.360037900630694 5 15.825680810639644 36.7034967882023 31.242762146023708 16.228060255134352 6 30.006967632181414 35.082819809792696 18.27250228484042 16.637710273185473 7 26.62436895608964 32.654903393582494 21.437677238077892 19.28305041224997 8 25.612539672844658 33.67379024687085 20.498673236014685 20.214996844269805 9 26.32759030283833 18.269172030725027 19.889362761179676 35.51387490525696 10-11 25.367573865435954 26.846183430614 25.68707298312294 22.09916972082711 12-13 26.081632606890686 25.648956940570162 25.23200465140481 23.037405801134344 14-15 24.529677338718844 25.96350754241175 23.524587985189466 25.982227133679935 16-17 24.248575154354747 27.77786256478434 24.211381920810066 23.76218036005085 18-19 24.25178994443217 27.071217377001556 25.484727748137708 23.192264930428575 20-21 25.963773922694642 25.74812636404427 25.08423026367096 23.203869449590123 22-23 25.998851738666573 25.546723838628598 24.75475127032061 23.699673152384225 24-25 24.941450336607595 26.10639794560602 24.922352834820735 24.02979888296565 26-27 24.38533910951369 26.26521572813153 25.060444785475394 24.289000376879383 28-29 24.35911560071525 26.22785682607209 25.20741349649579 24.205614076716863 30-31 24.78394031176324 25.821512691829422 25.322133314350246 24.07241368205709 32-33 24.390584252701608 26.19126174539111 25.050450381230878 24.36770362067641 34-35 24.706559042456416 26.153169004137045 25.161340262687148 23.978931690719392 36-37 24.605825093518906 26.30151025755906 24.87328831167657 24.219376337245468 38-39 24.539195301207066 26.194313253992057 25.03616563493637 24.230325809864507 40-41 24.281935946454613 26.146939056864856 25.31162016495062 24.259504831729913 42-43 24.361307992420773 26.219731970248045 25.137534447167454 24.281425590163728 44-45 24.434210221582287 26.219939637792866 25.080367144115197 24.265482996509657 46-47 24.52511274423681 26.119830048973057 24.99716126874622 24.357895938043914 48-49 24.349487317375175 26.34915291002183 25.088177344353713 24.213182428249286 50-51 24.131779687824807 26.528564843686453 25.106140921703137 24.23351454678561 52-53 24.17366194914799 26.271427320168733 25.095937320762076 24.458973409921196 54-55 24.024388314582364 26.03454276712787 25.30889379070934 24.632175127580425 56-57 24.210134974413677 26.10725745257759 24.88949884484412 24.793108728164615 58-59 24.18241532617791 26.136945962544473 25.189625179172843 24.49101353210478 60-61 24.264330682898905 26.23178520914058 25.256053890973735 24.247830216986777 62-63 23.953432136932932 26.152275511080376 25.361812815541 24.532479536445692 64-65 24.029702069618605 25.885968416407557 25.40524781011649 24.679081703857346 66-67 24.235633791277866 25.90677820059722 25.211583934367876 24.646004073757037 68-69 24.040881560192737 25.980219073730193 25.14014832022571 24.838751045851367 70-71 24.099823620004496 25.950344681086662 25.276575358098846 24.673256340809992 72-73 24.17110075830594 26.102628364551823 25.233870320757422 24.492400556384812 74-75 24.007644195789027 26.02924362456446 25.476547706741265 24.486564472905243 76-77 24.12672729440119 25.77042174824594 25.345176400267338 24.75767455708553 78-79 24.083140428720025 25.876884951632125 25.364475304160244 24.67549931548761 80-81 23.92199752676187 26.122546746064877 25.451473294056036 24.503982433117212 82-83 24.04301772760713 25.87109598809345 25.676269732656337 24.409616551643083 84-85 23.870348915045764 26.039579519155108 25.37255847873108 24.71751308706805 86-87 23.702364390279445 26.33313620196194 25.448869262361523 24.515630145397097 88-89 23.947895565168956 25.837780065009092 25.42607842893571 24.788245940886245 90-91 24.14872327554508 25.77708566680731 25.41316257246125 24.66102848518636 92-93 24.078624078624077 26.0431526239758 25.2992158947551 24.57900740264502 94-95 23.664937968526434 26.110779405426506 25.45456702240454 24.769715603642524 96-97 23.736680834239397 25.97404651294144 25.43413490729889 24.85513774552027 98-99 23.546949992827233 26.099494743548178 25.395321097083112 24.958234166541473 100-101 23.818400725556792 26.33339695885086 25.27414503681433 24.574057278778028 102-103 23.84172424582318 26.207467951650454 25.51793001943967 24.432877783086695 104-105 23.81685502594823 26.31990335703285 25.478400195183553 24.384841421835368 106-107 23.84044657879146 26.196179072040987 25.45570272961346 24.50767161955409 108-109 23.83419601331718 26.11505976635633 25.328510232147046 24.722233988179447 110-111 23.49861975801715 26.6679806449864 25.272434014945468 24.56096558205098 112-113 23.619863862749074 26.689192432652835 25.18951405450799 24.501429650090106 114-115 23.489566009468042 26.69766585592154 25.250748390980572 24.562019743629854 116-117 23.517794039492358 26.7503887054316 25.182464231475848 24.549353023600197 118-119 23.421961897265252 26.435713281410138 25.414904664109468 24.727420157215143 120-121 23.487241633622048 26.486894905124014 25.497024572547012 24.52883888870693 122-123 23.49643612641784 26.695112902114605 25.41503230695732 24.393418664510232 124-125 23.476624790506264 26.57916491617992 25.19656272163421 24.74764757167961 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2657.0 1 1638.5 2 513.5 3 354.0 4 253.5 5 203.0 6 187.0 7 174.0 8 176.5 9 183.5 10 168.5 11 138.0 12 147.5 13 174.0 14 182.0 15 211.5 16 246.0 17 278.5 18 293.5 19 319.0 20 407.0 21 518.0 22 643.5 23 822.0 24 1083.0 25 1393.0 26 1812.0 27 2427.0 28 3176.5 29 4235.5 30 5623.0 31 6985.5 32 8561.0 33 10154.0 34 11531.5 35 13128.0 36 14823.5 37 16691.0 38 18543.0 39 19965.0 40 20916.5 41 21702.5 42 22809.0 43 24692.5 44 27074.0 45 29168.5 46 31386.0 47 33746.5 48 35799.0 49 37168.0 50 37364.5 51 37138.0 52 37013.5 53 37145.5 54 36872.5 55 35787.0 56 33895.5 57 30494.5 58 27294.0 59 24401.5 60 21084.5 61 17919.5 62 14857.5 63 11902.5 64 9313.0 65 7381.0 66 5820.5 67 4607.0 68 3881.0 69 3306.0 70 2754.0 71 2321.0 72 1996.5 73 1784.5 74 1503.5 75 1308.0 76 1062.5 77 773.5 78 582.5 79 412.5 80 301.0 81 214.5 82 153.5 83 113.5 84 73.5 85 41.5 86 18.0 87 7.0 88 6.0 89 5.5 90 4.0 91 3.5 92 2.0 93 1.0 94 2.5 95 1.5 96 0.0 97 2.0 98 2.5 99 1.0 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.35903748644450306 2 0.3096627865818053 3 0.29872820693184715 4 0.301659125188537 5 0.32172464248433646 6 0.3388592415234462 7 0.34303016365796635 8 0.3368301442688148 9 0.35216110130380773 10-11 0.34427016753579665 12-13 0.3449465332873405 14-15 0.33745014620772995 16-17 0.2845808899620559 18-19 0.28176269933062337 20-21 0.26118990772116596 22-23 0.2567935303361312 24-25 0.2436607619936557 26-27 0.24749350125240394 28-29 0.23520619009935814 30-31 0.23622073872667385 32-33 0.23289527378158345 34-35 0.24382985343154162 36-37 0.23813710835604796 38-39 0.21762068055921918 40-41 0.243773489618913 42-43 0.23030253840066553 44-45 0.21840977393602032 46-47 0.22720252870608976 48-49 0.2193679587507074 50-51 0.21981886925173658 52-53 0.2560608007719588 54-55 0.24371712580628432 56-57 0.24219530286531077 58-59 0.23948983985913555 60-61 0.2559480731467015 62-63 0.2374043787918755 64-65 0.24490076587148601 66-67 0.2436607619936557 68-69 0.231035267964838 70-71 0.2336843671583846 72-73 0.2361643749140452 74-75 0.22297524275894098 76-77 0.23396618622152782 78-79 0.2432098514926265 80-81 0.227653439207119 82-83 0.24833895844183365 84-85 0.22145341981796743 86-87 0.2139006689257283 88-89 0.22398979138625671 90-91 0.21187157167109685 92-93 0.23362800334575592 94-95 0.21852250156127762 96-97 0.20927883629017893 98-99 0.20302245308839875 100-101 0.19220060106369788 102-103 0.20189517683582575 104-105 0.19992244339382298 106-107 0.2012751748969106 108-109 0.19969698814330836 110-111 0.196371523198218 112-113 0.19586424888456017 114-115 0.19101696099849622 116-117 0.20104971964639595 118-119 0.18256238910419864 120-121 0.18881877230597885 122-123 0.18949513805752266 124-125 0.1832951186683711 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 887094.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 80.46079316520017 #Duplication Level Percentage of deduplicated Percentage of total 1 88.221822086901 70.9839777959123 2 8.236011889330934 13.253520982671715 3 1.781369809522724 4.299912833842198 4 0.6564086164542808 2.1126063168153237 5 0.34642915843514116 1.3936982431622125 6 0.20027946923733567 0.9668786969724801 7 0.1285365759911575 0.723950839849129 8 0.09019365240412452 0.5805642248721778 9 0.059196155898102995 0.42866726903029884 >10 0.26458607720846294 3.550712911614252 >50 0.009372808165853652 0.5204891750969578 >100 0.0054528945450613075 0.6786824635026648 >500 0.0 0.0 >1k 3.4080590576886715E-4 0.5063382466583549 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2152 0.24258984955371132 No Hit NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1541 0.17371327052150054 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.127276252573008E-4 0.0 5 0.0 0.0 0.0 1.127276252573008E-4 0.0 6 0.0 0.0 0.0 1.127276252573008E-4 0.0 7 0.0 0.0 0.0 1.127276252573008E-4 0.0 8 0.0 0.0 0.0 1.127276252573008E-4 1.127276252573008E-4 9 0.0 0.0 0.0 1.127276252573008E-4 1.127276252573008E-4 10-11 0.0 0.0 0.0 1.127276252573008E-4 1.127276252573008E-4 12-13 0.0 0.0 0.0 1.127276252573008E-4 1.127276252573008E-4 14-15 0.0 0.0 0.0 2.254552505146016E-4 1.127276252573008E-4 16-17 0.0 0.0 0.0 3.945466884005528E-4 1.127276252573008E-4 18-19 0.0 0.0 0.0 5.072743136578536E-4 1.127276252573008E-4 20-21 0.0 0.0 0.0 0.001127276252573008 4.509105010292032E-4 22-23 0.0 0.0 0.0 0.0021981886925173657 4.509105010292032E-4 24-25 0.0 0.0 0.0 0.004565468822920683 4.509105010292032E-4 26-27 0.0 0.0 0.0 0.007947297580639707 4.509105010292032E-4 28-29 0.0 0.0 0.0 0.013865497906648 4.509105010292032E-4 30-31 0.0 0.0 0.0 0.03032373119421392 4.509105010292032E-4 32-33 0.0 0.0 0.0 0.057716544131738004 4.509105010292032E-4 34-35 0.0 0.0 0.0 0.08837845820172383 4.509105010292032E-4 36-37 5.63638126286504E-5 0.0 0.0 0.13482223980773175 4.509105010292032E-4 38-39 1.127276252573008E-4 0.0 0.0 0.19834425664022076 4.509105010292032E-4 40-41 1.127276252573008E-4 0.0 0.0 0.2627680944747682 4.509105010292032E-4 42-43 1.127276252573008E-4 0.0 0.0 0.31721553747404446 4.509105010292032E-4 44-45 1.127276252573008E-4 0.0 0.0 0.38090664574441946 4.509105010292032E-4 46-47 1.127276252573008E-4 0.0 0.0 0.46545236468739504 5.072743136578536E-4 48-49 1.127276252573008E-4 0.0 0.0 0.5502799026935139 5.63638126286504E-4 50-51 1.127276252573008E-4 0.0 0.0 0.6210728513550988 5.63638126286504E-4 52-53 1.127276252573008E-4 0.0 0.0 0.6892730646357658 5.63638126286504E-4 54-55 1.127276252573008E-4 0.0 0.0 0.7597841942342074 5.63638126286504E-4 56-57 1.127276252573008E-4 0.0 0.0 0.8368335260975726 5.63638126286504E-4 58-59 1.127276252573008E-4 0.0 0.0 0.9245356185477525 5.63638126286504E-4 60-61 1.127276252573008E-4 0.0 0.0 1.0153377206925083 5.63638126286504E-4 62-63 1.127276252573008E-4 0.0 0.0 1.0980234338187385 5.63638126286504E-4 64-65 1.127276252573008E-4 0.0 0.0 1.1813291488838837 6.200019389151544E-4 66-67 1.127276252573008E-4 0.0 0.0 1.2661566868900027 6.763657515438048E-4 68-69 1.127276252573008E-4 0.0 0.0 1.3669915476826582 6.763657515438048E-4 70-71 1.127276252573008E-4 0.0 0.0 1.4721100582350912 6.763657515438048E-4 72-73 1.127276252573008E-4 0.0 0.0 1.5761576563475799 6.763657515438048E-4 74-75 1.127276252573008E-4 0.0 0.0 1.6762034237634342 7.890933768011057E-4 76-77 1.127276252573008E-4 0.0 0.0 1.781378298128496 7.890933768011057E-4 78-79 1.127276252573008E-4 0.0 0.0 1.9032368610316381 7.890933768011057E-4 80-81 1.127276252573008E-4 0.0 0.0 2.038340919902513 7.890933768011057E-4 82-83 1.127276252573008E-4 0.0 0.0 2.1657231364432628 7.890933768011057E-4 84-85 1.127276252573008E-4 0.0 0.0 2.2932180806092703 7.890933768011057E-4 86-87 1.127276252573008E-4 0.0 0.0 2.420431205712134 7.890933768011057E-4 88-89 1.127276252573008E-4 0.0 0.0 2.56010073340593 7.890933768011057E-4 90-91 1.127276252573008E-4 0.0 0.0 2.7077175586803657 7.890933768011057E-4 92-93 1.127276252573008E-4 0.0 0.0 2.859505306089321 9.018210020584064E-4 94-95 1.127276252573008E-4 0.0 0.0 3.011067598247762 9.018210020584064E-4 96-97 1.127276252573008E-4 0.0 0.0 3.1624607989683167 9.018210020584064E-4 98-99 1.127276252573008E-4 0.0 0.0 3.323661303086257 9.018210020584064E-4 100-101 1.127276252573008E-4 0.0 0.0 3.495063657289983 9.581848146870569E-4 102-103 1.127276252573008E-4 0.0 0.0 3.687433349791567 0.0010145486273157073 104-105 1.127276252573008E-4 0.0 0.0 3.87523757347023 0.0010145486273157073 106-107 1.127276252573008E-4 0.0 0.0 4.0735818301104505 0.0010145486273157073 108-109 1.127276252573008E-4 0.0 0.0 4.2709115381233556 0.0010709124399443577 110-111 1.127276252573008E-4 0.0 0.0 4.479401281036734 0.0011836400652016584 112-113 1.127276252573008E-4 0.0 0.0 4.705251078239735 0.0012400038778303088 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2060 0.0 44.25415 1 GTATCAA 3135 0.0 38.582314 1 CAACGCA 3880 0.0 30.546017 5 TATCAAC 3950 0.0 30.460474 2 ATCAACG 3930 0.0 29.857677 3 TCAACGC 4035 0.0 29.22833 4 AACGCAG 4090 0.0 28.678293 6 ACGCAGA 4705 0.0 24.803148 7 CGCAGAG 4815 0.0 24.483826 8 GCAGAGT 5270 0.0 22.034748 9 GTACTAC 250 5.204256E-7 21.450249 1 GTACATG 6505 0.0 20.517788 1 AGAGTAC 4880 0.0 20.439915 10-11 TACATGG 6670 0.0 19.914133 2 CAGAGTA 5175 0.0 19.907642 10-11 ACATGGG 6655 0.0 19.60101 3 CATGGGG 3930 0.0 19.399912 4 GCGAATA 80 0.006854282 18.584244 112-113 GAGTACA 5500 0.0 18.081642 12-13 AGTACAT 5465 0.0 17.925028 12-13 >>END_MODULE