ERR1142472_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1142472_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	56113
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	262	0.46691497513945074	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	234	0.4170156648192041	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	175	0.3118706895015415	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	152	0.27088197030991035	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	133	0.23702172402117155	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG	129	0.22989325111827918	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	121	0.21563630531249442	No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT	120	0.21385418708677134	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC	114	0.2031614777324328	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	106	0.18890453192664802	No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	98	0.17464758612086326	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	88	0.1568264038636323	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	66	0.11761980289772422	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	65	0.11583768467200115	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	62	0.11049132999483184	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	58	0.10336285709193949	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	57	0.1015807388662164	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATGGGT	25	0.0020220648	71.6172	4
GTACAAA	55	1.651988E-7	65.16494	1
GTACTAG	30	0.0041503077	59.73453	1
TTGTACA	30	0.004165087	59.681007	4
TACAAGA	40	1.7311398E-4	59.681004	2
TAGGCAT	55	1.2714687E-5	54.25546	5
GTACATA	35	0.0076379157	51.201027	1
TACATAA	35	0.007665069	51.155148	2
AGTACAA	35	0.007665069	51.155148	2
TACAAAG	35	0.007665069	51.155148	2
AAGGGGT	35	0.0077469586	51.017998	7
GTACAAG	60	2.1165693E-5	49.778778	1
ACAAGAG	50	5.2102166E-4	47.7448	3
GAGACAG	55	8.444177E-4	43.288002	7
CTAGGCA	60	0.0012786095	39.78734	4
ATGGGAC	80	1.6370905E-10	37.26723	18-19
GGGACTG	65	4.1321982E-8	36.62831	20-21
AGTCCTA	35	0.002773492	34.012	28-29
GTAAAAA	100	4.2853772E-4	29.867264	1
TTGTGAT	60	3.657788E-5	29.760502	26-27