##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1142459_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 503188 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.82240633719405 33.0 33.0 33.0 27.0 33.0 2 30.9327070597868 33.0 33.0 33.0 27.0 33.0 3 31.03232787745336 33.0 33.0 33.0 27.0 33.0 4 31.032133119231776 33.0 33.0 33.0 27.0 33.0 5 31.04215521832794 33.0 33.0 33.0 27.0 33.0 6 34.24273035128024 37.0 37.0 37.0 27.0 37.0 7 34.215841792729556 37.0 37.0 37.0 27.0 37.0 8 34.25646279323036 37.0 37.0 37.0 27.0 37.0 9 34.2333660580141 37.0 37.0 37.0 27.0 37.0 10-11 34.304846299991254 37.0 37.0 37.0 27.0 37.0 12-13 34.23453162635039 37.0 37.0 37.0 27.0 37.0 14-15 34.21713256277972 37.0 37.0 37.0 27.0 37.0 16-17 34.178274322917076 37.0 37.0 37.0 27.0 37.0 18-19 34.219667400653435 37.0 37.0 37.0 27.0 37.0 20-21 34.193984157014874 37.0 37.0 37.0 27.0 37.0 22-23 34.264770821243744 37.0 37.0 37.0 27.0 37.0 24-25 34.32637105813334 37.0 37.0 37.0 27.0 37.0 26-27 34.36279780121943 37.0 37.0 37.0 27.0 37.0 28-29 34.39264946699842 37.0 37.0 37.0 27.0 37.0 30-31 34.33220486180116 37.0 37.0 37.0 27.0 37.0 32-33 34.33868653465504 37.0 37.0 37.0 27.0 37.0 34-35 34.386403292606346 37.0 37.0 37.0 27.0 37.0 36-37 34.38091429048387 37.0 37.0 37.0 27.0 37.0 38-39 34.344194416401024 37.0 37.0 37.0 27.0 37.0 40-41 34.30877127435471 37.0 37.0 37.0 27.0 37.0 42-43 34.315049246007455 37.0 37.0 37.0 27.0 37.0 44-45 34.29589735844257 37.0 37.0 37.0 27.0 37.0 46-47 34.28277303910268 37.0 37.0 37.0 27.0 37.0 48-49 34.27988346303966 37.0 37.0 37.0 27.0 37.0 50-51 34.19495794812277 37.0 37.0 37.0 27.0 37.0 52-53 34.20766492841642 37.0 37.0 37.0 27.0 37.0 54-55 34.16938301390336 37.0 37.0 37.0 27.0 37.0 56-57 34.14332515878757 37.0 37.0 37.0 27.0 37.0 58-59 34.09220311295182 37.0 37.0 37.0 27.0 37.0 60-61 34.07353116529011 37.0 37.0 37.0 27.0 37.0 62-63 34.05524774040717 37.0 37.0 37.0 27.0 37.0 64-65 34.00349968600205 37.0 37.0 37.0 27.0 37.0 66-67 33.95984602176522 37.0 37.0 37.0 27.0 37.0 68-69 33.92990890084819 37.0 37.0 37.0 27.0 37.0 70-71 33.878271143191014 37.0 37.0 37.0 27.0 37.0 72-73 33.8136382425654 37.0 37.0 37.0 27.0 37.0 74-75 33.72434656629331 37.0 35.0 37.0 22.0 37.0 76-77 33.676956723928235 37.0 33.0 37.0 22.0 37.0 78-79 33.61432705072458 37.0 33.0 37.0 22.0 37.0 80-81 33.555193088865394 37.0 33.0 37.0 22.0 37.0 82-83 33.500473977916805 37.0 33.0 37.0 22.0 37.0 84-85 33.43119569624077 37.0 33.0 37.0 14.0 37.0 86-87 33.336459732744025 37.0 33.0 37.0 14.0 37.0 88-89 33.27151680882692 37.0 33.0 37.0 14.0 37.0 90-91 33.170179932748795 37.0 33.0 37.0 14.0 37.0 92-93 33.084932470567665 37.0 33.0 37.0 14.0 37.0 94-95 33.012925586460725 37.0 33.0 37.0 14.0 37.0 96-97 32.906380915284146 37.0 33.0 37.0 14.0 37.0 98-99 32.7810361137388 37.0 33.0 37.0 14.0 37.0 100-101 32.6887823239028 37.0 33.0 37.0 14.0 37.0 102-103 32.56509296724087 37.0 33.0 37.0 14.0 37.0 104-105 32.40505636064454 37.0 33.0 37.0 14.0 37.0 106-107 32.32233280602876 37.0 33.0 37.0 14.0 37.0 108-109 32.20209444581349 37.0 33.0 37.0 14.0 37.0 110-111 32.11676053482992 37.0 33.0 37.0 14.0 37.0 112-113 31.94969176530442 37.0 33.0 37.0 14.0 37.0 114-115 31.832500973791106 37.0 27.0 37.0 14.0 37.0 116-117 31.64273194114327 37.0 27.0 37.0 14.0 37.0 118-119 31.544858979148948 37.0 27.0 37.0 14.0 37.0 120-121 31.444608178255443 37.0 27.0 37.0 14.0 37.0 122-123 31.350634355350287 37.0 27.0 37.0 14.0 37.0 124-125 29.779832786155474 35.0 24.5 37.0 14.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 962.0 1 63.0 2 30.0 3 25.0 4 26.0 5 20.0 6 20.0 7 23.0 8 21.0 9 25.0 10 14.0 11 15.0 12 22.0 13 18.0 14 39.0 15 134.0 16 249.0 17 622.0 18 1628.0 19 3130.0 20 4584.0 21 5655.0 22 6050.0 23 6626.0 24 7416.0 25 7942.0 26 9183.0 27 10467.0 28 11784.0 29 13805.0 30 16113.0 31 19314.0 32 23714.0 33 30932.0 34 44150.0 35 77612.0 36 200755.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.83179528108944 19.188706539631863 12.119718661146306 24.859779518132388 2 17.565411296338404 22.544608130587235 35.55785593757854 24.332124635495823 3 20.13605387909114 26.4044641307968 27.903210688067265 25.5562713020448 4 14.775700338204325 18.83475049454406 33.64474985642269 32.744799310828924 5 15.947790115306137 36.68574141187687 31.05825941786457 16.308209054952417 6 30.48259339134872 35.20966462430189 18.043834436901292 16.263907547448106 7 26.850978930521148 32.4682443031087 21.341143783098573 19.339632983271578 8 25.708750944170855 33.411989325637805 20.378943844006034 20.500315886185312 9 26.27455123119915 17.928627522891894 19.770941547440135 36.02587969846883 10-11 25.341374987293737 26.704881796855222 25.621411102983533 22.33233211286751 12-13 26.122555998197527 25.40077043630143 25.114050094310652 23.36262347119039 14-15 24.618446054790557 25.73271025240762 23.266686283408724 26.38215740939309 16-17 24.36720567398516 27.557476221291804 23.989398669648708 24.08591943507433 18-19 24.455707408400635 26.75031477702422 25.306577369351334 23.487400445223813 20-21 26.078175915247126 25.624527137686542 24.701280603349886 23.59601634371645 22-23 25.68456557795356 25.563759887726462 24.56302628221485 24.18864825210513 24-25 24.81889311778899 26.143571988802215 24.666612850341785 24.37092204306701 26-27 24.629725417265895 26.15716724620955 24.73018616133318 24.48292117519138 28-29 24.446650104287183 26.058841291148095 25.093599367799424 24.400909236765294 30-31 24.726116338145793 25.97492418557418 24.977053865863027 24.321905610416998 32-33 24.40983173639865 26.020418840341407 24.85916580716204 24.710583616097896 34-35 24.703869622922006 26.107101150643874 24.85392761346018 24.33510161297394 36-37 24.64873428757903 26.16609455103454 24.651623928217344 24.533547233169088 38-39 24.49372240693709 26.05303248446419 24.837069533273088 24.616175575325634 40-41 24.411328012117224 26.097276613554154 25.06681414606439 24.424581228264227 42-43 24.60557387829934 26.06799453971164 24.98560197686352 24.340829605125496 44-45 24.37949295325585 26.27406828043501 24.798760530261895 24.547678236047247 46-47 24.473533186140493 26.019755457958375 24.872567930558986 24.634143425342145 48-49 24.459104979013762 26.267318752721035 24.92983831679706 24.34373795146814 50-51 24.18401912922188 26.49367340838896 24.87825047324898 24.44405698914018 52-53 24.239290386280377 26.150118411758083 24.883506143761938 24.727085058199602 54-55 24.299041210129715 26.04893484951592 25.043914230003956 24.608109710350405 56-57 24.339061335586276 25.93003654391048 24.811302708712756 24.91959941179049 58-59 24.35666388720361 26.035499421692364 24.95908012723764 24.648756563866385 60-61 24.384869263237803 26.108799365617628 24.968146394092113 24.538184977052452 62-63 23.981773334236564 26.25243573446609 24.912333483429038 24.85345744786831 64-65 24.088809904248834 25.878814805369714 25.131593103365834 24.900782187015615 66-67 24.311215595644857 25.8915995098967 24.905814497893154 24.891370396565293 68-69 24.329884377285108 25.81646214018582 24.853304801241705 25.00034868128737 70-71 24.022717016543655 25.76444792888032 25.084850108932894 25.127984945643135 72-73 24.31774218932094 25.72698133166525 25.098959505790152 24.85631697322366 74-75 24.28757018693935 25.690711214368545 25.225554621279443 24.796163977412657 76-77 24.25637750145232 25.615728695742284 25.097278009340684 25.03061579346471 78-79 24.30365017026423 25.554180689306133 25.23168488862587 24.910484251803762 80-81 24.06812928423402 25.79447632711621 25.267814442850312 24.869579945799458 82-83 24.28530581787714 25.636935853613096 25.25765852288068 24.820099805629088 84-85 24.106716772553877 25.753257065318643 25.087647112153434 25.05237904997405 86-87 24.00608863789639 25.927615738411713 25.15617575363331 24.910119870058587 88-89 24.301716598835412 25.450066835198943 25.11429715467319 25.13391941129246 90-91 24.41290332861578 25.606468197332603 25.02850950798316 24.952118966068458 92-93 24.11180380348874 25.914840339331835 25.089519339663518 24.88383651751591 94-95 23.785042447324283 25.8303222490907 25.336829776469322 25.047805527115692 96-97 23.927273596395747 25.70300961910955 25.2264857635386 25.143231020956097 98-99 23.833307273485982 25.95730102310629 25.173414175295466 25.03597752811227 100-101 24.06770108281105 26.086445643363426 24.918993306367614 24.92685996745791 102-103 24.145780886523692 26.033467703387398 25.17944775501099 24.641303655077916 104-105 23.956048990258118 26.28535690028463 25.048749250586088 24.70984485887117 106-107 23.946819146859777 26.252942652629567 25.195878095511237 24.604360104999422 108-109 23.924785255791072 26.29996674028946 24.983121194800333 24.792126809119136 110-111 23.814962935227268 26.50021709082363 24.89902289212777 24.785797081821332 112-113 23.851783105679868 26.557335911757356 24.810924976424747 24.77995600613803 114-115 23.71534654204714 26.600035645405875 24.93575363647859 24.74886417606839 116-117 23.866495793390712 26.703430310887793 24.785885628422317 24.644188267299178 118-119 23.64310868571736 26.456007877551468 24.996191653897508 24.90469178283367 120-121 23.651474178478548 26.45635611277276 25.09090402207982 24.80126568666887 122-123 23.6560531495573 26.59210223703245 24.99912884267496 24.752715770735286 124-125 23.783808539574633 26.594225840944794 24.859369617465447 24.762596002015123 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1495.0 1 848.0 2 174.0 3 141.5 4 116.5 5 98.0 6 85.0 7 72.0 8 79.5 9 77.0 10 72.0 11 72.0 12 67.0 13 71.0 14 81.0 15 93.5 16 110.5 17 129.5 18 145.0 19 182.0 20 223.5 21 287.0 22 378.5 23 506.0 24 644.5 25 833.5 26 1122.0 27 1411.0 28 1732.5 29 2316.5 30 3094.5 31 3772.5 32 4531.0 33 5272.0 34 6014.0 35 7004.0 36 7945.0 37 8882.0 38 9862.0 39 10566.5 40 11117.5 41 11597.5 42 12186.5 43 13385.0 44 14884.5 45 16136.0 46 17600.0 47 18963.5 48 20219.5 49 21446.0 50 22060.5 51 21796.5 52 21231.5 53 21334.0 54 21212.5 55 20385.5 56 19144.0 57 17592.5 58 16431.0 59 15011.0 60 13005.0 61 11103.0 62 9202.5 63 7175.5 64 5604.0 65 4511.0 66 3478.5 67 2733.5 68 2226.5 69 1839.0 70 1561.0 71 1366.5 72 1205.5 73 1114.0 74 913.0 75 734.5 76 588.0 77 392.0 78 276.0 79 196.0 80 131.0 81 95.5 82 62.0 83 30.0 84 12.5 85 10.0 86 9.5 87 5.5 88 1.5 89 0.5 90 0.5 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 1.5 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4000492857540323 2 0.3620913058340024 3 0.351558463238392 4 0.34102562064278164 5 0.3630849702298147 6 0.29452212691876595 7 0.291541133731329 8 0.28319435280650573 9 0.29452212691876595 10-11 0.291541133731329 12-13 0.3287041821347091 14-15 0.3806728300356924 16-17 0.3460933090614244 18-19 0.32641875402434084 20-21 0.31568717854956796 22-23 0.309228359976788 24-25 0.2944227604791847 26-27 0.29799995230410903 28-29 0.28786457546682354 30-31 0.2920379659292352 32-33 0.28726837682933615 34-35 0.2746488390025199 36-37 0.27733173287121315 38-39 0.2709722807380144 40-41 0.2827968870481808 42-43 0.2748475718816824 44-45 0.270376082100527 46-47 0.26868685262764613 48-49 0.2606381710215665 50-51 0.2659045923193717 52-53 0.2658052258797905 54-55 0.26977988346303966 56-57 0.2635197977694222 58-59 0.2568622463174798 60-61 0.25487491752585517 62-63 0.25557048260292375 64-65 0.2508008935030247 66-67 0.2490122975905626 68-69 0.2577565442737108 70-71 0.253086321613393 72-73 0.2414604481823891 74-75 0.26113500321947264 76-77 0.2791203287836753 78-79 0.26252613337360986 80-81 0.2678919211109963 82-83 0.260836903900729 84-85 0.2618305682965413 86-87 0.2522913900967432 88-89 0.2398705851490894 90-91 0.23102697202635994 92-93 0.23877755431369585 94-95 0.22933774255347902 96-97 0.22148779382656186 98-99 0.22625738292646086 100-101 0.21244544782466993 102-103 0.21701630404540648 104-105 0.22436942057441753 106-107 0.21661883828708156 108-109 0.21443277661629453 110-111 0.21741376980373142 112-113 0.2131410129017385 114-115 0.20260817030612813 116-117 0.21095495123095148 118-119 0.19903097848120382 120-121 0.20072020795408474 122-123 0.1952550537771171 124-125 0.19575188597502324 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 503188.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.00433999535039 #Duplication Level Percentage of deduplicated Percentage of total 1 90.06912619065889 75.66197499604228 2 7.388806200373406 12.413835764318414 3 1.354475447669874 3.4134544806424354 4 0.478958462967646 1.609383582671383 5 0.22895926210892512 0.9616785849641346 6 0.11492620976630602 0.5792580239751438 7 0.0719349614147966 0.422999426936869 8 0.05082289887759992 0.3415475261490573 9 0.04295789339736323 0.3247784534192506 >10 0.18505774890734575 2.7941856161672494 >50 0.010212298537751885 0.5745520854187588 >100 0.0032249359886399437 0.4668658538459097 >500 2.687446657199815E-4 0.18941027629434537 >1k 2.687446657199815E-4 0.24607532915475144 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1090 0.21661883828708156 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 839 0.16673688561730407 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 2.9809931874369026E-4 0.0 18-19 0.0 0.0 0.0 6.955650770686106E-4 0.0 20-21 0.0 0.0 0.0 0.0014904965937184511 1.9873287916246017E-4 22-23 0.0 0.0 0.0 0.0029809931874369023 3.9746575832492033E-4 24-25 0.0 0.0 0.0 0.006558185012361184 3.9746575832492033E-4 26-27 0.0 0.0 0.0 0.010830941914354079 3.9746575832492033E-4 28-29 0.0 0.0 0.0 0.020171387234989707 3.9746575832492033E-4 30-31 0.0 0.0 0.0 0.04183327106369786 3.9746575832492033E-4 32-33 0.0 0.0 0.0 0.07522039476299117 3.9746575832492033E-4 34-35 0.0 0.0 0.0 0.11218471028720875 3.9746575832492033E-4 36-37 0.0 0.0 0.0 0.1625634951548924 3.9746575832492033E-4 38-39 0.0 0.0 0.0 0.2316231706638473 3.9746575832492033E-4 40-41 0.0 0.0 0.0 0.31220935316422493 3.9746575832492033E-4 42-43 0.0 0.0 0.0 0.37878486768364905 3.9746575832492033E-4 44-45 0.0 0.0 0.0 0.44446608424684214 3.9746575832492033E-4 46-47 0.0 0.0 0.0 0.5258471982638695 3.9746575832492033E-4 48-49 0.0 0.0 0.0 0.6119979013807961 3.9746575832492033E-4 50-51 0.0 0.0 0.0 0.6990429024539536 3.9746575832492033E-4 52-53 0.0 0.0 0.0 0.7720772355461577 5.961986374873805E-4 54-55 0.0 0.0 0.0 0.8505767228153294 7.949315166498407E-4 56-57 0.0 0.0 0.0 0.936329960173931 7.949315166498407E-4 58-59 1.9873287916246017E-4 0.0 0.0 1.0259584886762005 8.942979562310707E-4 60-61 1.9873287916246017E-4 0.0 0.0 1.1195616747617194 9.936643958123007E-4 62-63 1.9873287916246017E-4 0.0 0.0 1.2081965388681766 9.936643958123007E-4 64-65 1.9873287916246017E-4 0.0 0.0 1.2928567453913846 9.936643958123007E-4 66-67 1.9873287916246017E-4 0.0 0.0 1.385466267081091 0.0010930308353935309 68-69 1.9873287916246017E-4 0.0 0.0 1.4890060971247325 0.0011923972749747608 70-71 1.9873287916246017E-4 0.0 0.0 1.6089413896992775 0.0011923972749747608 72-73 1.9873287916246017E-4 0.0 0.0 1.723610260976017 0.0013911301541372212 74-75 1.9873287916246017E-4 0.0 0.0 1.82804438897589 0.0017885959124621415 76-77 1.9873287916246017E-4 0.0 0.0 1.9399309999443548 0.0020866952312058318 78-79 1.9873287916246017E-4 0.0 0.0 2.0617542548709427 0.0021860616707870617 80-81 1.9873287916246017E-4 0.0 0.0 2.1957002154264407 0.0021860616707870617 82-83 1.9873287916246017E-4 0.0 0.0 2.3350119637193254 0.0023847945499495217 84-85 1.9873287916246017E-4 0.0 0.0 2.4641883351749243 0.0023847945499495217 86-87 1.9873287916246017E-4 0.0 0.0 2.5927685079930365 0.0023847945499495217 88-89 1.9873287916246017E-4 0.0 0.0 2.7388371741774447 0.0023847945499495217 90-91 1.9873287916246017E-4 0.0 0.0 2.8902716280992395 0.0023847945499495217 92-93 1.9873287916246017E-4 0.0 0.0 3.057704078793612 0.0023847945499495217 94-95 1.9873287916246017E-4 0.0 0.0 3.213610022496562 0.002583527429111982 96-97 1.9873287916246017E-4 0.0 0.0 3.3692178668807684 0.0027822603082744424 98-99 1.9873287916246017E-4 0.0 0.0 3.5383395470480217 0.0027822603082744424 100-101 1.9873287916246017E-4 0.0 0.0 3.7260427514169656 0.0027822603082744424 102-103 1.9873287916246017E-4 0.0 0.0 3.9160313838962777 0.0028816267478556723 104-105 1.9873287916246017E-4 0.0 0.0 4.11734779048785 0.0029809931874369023 106-107 1.9873287916246017E-4 0.0 0.0 4.310714881912924 0.0029809931874369023 108-109 1.9873287916246017E-4 0.0 0.0 4.51401861729612 0.0029809931874369023 110-111 1.9873287916246017E-4 0.0 0.0 4.738388037870537 0.0031797260665993627 112-113 1.9873287916246017E-4 0.0 0.0 4.966831482467786 0.0031797260665993627 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2410 0.0 26.45493 1 CTAACGC 115 9.985544E-4 25.89378 3 GGTATCA 1820 0.0 25.5366 1 GTATGAC 155 2.0836218E-4 23.065317 1 CATGGGT 680 0.0 22.771296 4 TATCAAC 2795 0.0 22.586416 2 CATGGGG 1795 0.0 22.229702 4 ATCAACG 2730 0.0 21.815271 3 AACGCAG 2800 0.0 21.252937 6 GTACATG 3980 0.0 21.109402 1 CAACGCA 2780 0.0 20.994453 5 TCAACGC 2810 0.0 20.982254 4 ACATGGG 3860 0.0 20.674774 3 TACATGG 4075 0.0 20.022404 2 ATGGGGG 1060 0.0 19.664616 5 ACGCAGA 2995 0.0 19.475685 7 GTAAGGC 185 6.904221E-4 19.315361 3 CGCAGAG 3050 0.0 19.130205 8 GTATAGG 160 0.006771135 18.620438 1 TTTTGCG 80 0.006850217 18.585207 86-87 >>END_MODULE