ERR1042817.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042817.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12015937
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	65280	0.5432784809041525	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	55719	0.46370915559893494	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	36807	0.30631818392523197	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	34751	0.2892075749065595	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	27141	0.22587501915164837	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26541	0.22088165076098518	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	22659	0.1885745572733945	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	22633	0.18835817797646576	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	20261	0.16861772827204405	No Hit
CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGT	16379	0.13631063478445335	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	16217	0.1349624253189743	No Hit
TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG	15216	0.1266318223872179	No Hit
GGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAG	12612	0.10496060357173975	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTAACGG	2315	17.900648	35
TAACGGC	2410	17.118258	36
TTTAACG	2635	16.148008	34
GTATTAG	3930	14.592876	1
AACGGCC	2940	14.409864	37
ATTAGAG	3375	14.251851	3
TAATACT	3720	14.123655	4
CTAATAC	3725	14.055033	3
TCTAATA	3270	13.860856	2
TATTAGA	3750	13.566668	2
CTCTAAT	3080	13.51461	1
GTTTAAC	3140	13.492039	33
TAGGGGT	2065	13.348669	4
GGGTTAG	2095	13.245823	7
GGGGTTA	2140	13.226635	6
TAGGACC	2365	13.219873	4
AATACTG	4245	12.681979	5
TACTGGT	3635	12.672628	7
TTAGGAC	2140	12.621495	3
GATGCTA	3380	12.369823	14