Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042812.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19994058 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 104881 | 0.5245608470276519 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 84913 | 0.42469117574831483 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 60013 | 0.30015417580563186 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 47421 | 0.23717546483060115 | No Hit |
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG | 41513 | 0.20762668588837743 | No Hit |
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT | 30504 | 0.15256532715869883 | No Hit |
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG | 26254 | 0.13130901190743768 | No Hit |
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG | 25640 | 0.12823809953937315 | No Hit |
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG | 22644 | 0.11325364765871941 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTAACGG | 3765 | 0.0 | 15.92032 | 35 |
GGGGTTA | 3860 | 0.0 | 15.816063 | 6 |
TAACGGC | 3895 | 0.0 | 15.38896 | 36 |
TAGGGGT | 3990 | 0.0 | 15.20802 | 4 |
GGGTTAG | 4050 | 0.0 | 15.119754 | 7 |
ATAGGGG | 4165 | 0.0 | 14.52461 | 3 |
GTATTAG | 6980 | 0.0 | 14.259313 | 1 |
ATTAGAG | 5210 | 0.0 | 13.52879 | 3 |
TAATACT | 6785 | 0.0 | 13.496684 | 4 |
CTCTAAT | 5565 | 0.0 | 13.463612 | 1 |
ATCTCGT | 2065 | 0.0 | 13.438257 | 37 |
TTTAACG | 4725 | 0.0 | 13.233863 | 34 |
CTAATAC | 7410 | 0.0 | 13.15722 | 3 |
TATTAGA | 6045 | 0.0 | 13.098429 | 2 |
TCTAATA | 6070 | 0.0 | 12.983526 | 2 |
AACGGCC | 4805 | 0.0 | 12.936524 | 37 |
GTATAGG | 6610 | 0.0 | 12.818458 | 1 |
GGTAAAC | 5395 | 0.0 | 12.344764 | 35 |
AATACTG | 7280 | 0.0 | 12.17239 | 5 |
ATGCTAG | 5630 | 0.0 | 11.993783 | 15 |