ERR1042809.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042809.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13798875
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	49498	0.35871040211611455	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	43912	0.3182288411192941	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	33635	0.2437517551249649	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	28633	0.20750242320479026	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	24403	0.1768477502694966	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	22520	0.1632017102843529	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	20913	0.1515558333559801	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20491	0.14849761303004774	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	17986	0.13034395919957242	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	16251	0.11777047041878413	No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG	16046	0.11628484206139993	No Hit
CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGT	15997	0.11592974064914713	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	15525	0.11250917194336495	No Hit
TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG	14828	0.10745803552825864	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGGTTA	3405	15.919237	6
TAGGGGT	3435	15.834061	4
ATAGGGG	3580	15.7094965	3
TTAACGG	3960	15.603535	35
TAACGGC	4000	15.2625	36
GGGTTAG	3635	14.81018	7
GGGTAAG	2085	14.729016	1
GTATTAG	6160	14.295454	1
CTCTAAT	4900	14.158163	1
ATTAGAG	5060	14.076086	3
TTTAACG	4630	13.944924	34
TATTAGA	5465	13.879231	2
CCGAGTT	1700	13.820587	13
TAACTAG	3875	13.749678	26
AACGGCC	4520	13.670354	37
TCTAATA	5460	13.519231	2
CTAATAC	6160	13.51461	3
GGTAAAC	4800	13.335417	35
AACTAGA	4055	13.321825	27
TAATACT	5940	13.298821	4