ERR1042802.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042802.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9433544
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	42006	0.44528334208225456	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	41646	0.44146717288857723	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	30643	0.32483020167182136	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	21815	0.23124925266686625	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19263	0.20419685327168666	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	14754	0.1563993341208776	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	13023	0.1380499205812789	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	12747	0.13512419086612623	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	10905	0.11559812515847703	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTAACGG	1950	15.274359	35
TAACGGC	1975	14.987342	36
GGGGTTA	1555	14.157557	6
GTATTAG	3660	13.79918	1
TAATACT	3625	13.728277	4
TAGGGGT	1775	13.236619	4
ATTAGAG	2745	13.007286	3
ATAGGGG	1680	12.994047	3
TCTAGAC	930	12.930107	3
GTTTAGG	2170	12.873272	1
GGGTTAG	1675	12.81194	7
AACGGCC	2365	12.672304	37
TATTAGA	3055	12.595745	2
TTTAGCG	485	12.587629	26
TCTAATA	3205	12.52574	2
AATACTG	3725	12.515436	5
CTCTAAT	2940	12.459184	1
TTTAACG	2505	12.4071865	34
GGTAAAC	2760	12.266304	35
TAGGACC	2070	12.065217	4