ERR1042775.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042775.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9930329
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	80402	0.8096609890769983	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	61168	0.6159715352834735	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36837	0.37095447693626266	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	29596	0.2980364497490466	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14263	0.1436306893759512	No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG	10527	0.1060085723242402	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10101	0.10171868424500335	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTAACGG	2775	14.0	35
TATTAGA	3890	13.601542	2
TAACGGC	2865	13.56021	36
ATTAGAG	3485	13.111909	3
GTATTAG	4365	13.053837	1
GGTATCA	34605	13.001589	1
AGGTCGC	3135	12.805423	35
GTCGCCC	3265	12.295559	37
TATACTG	1345	12.241635	5
TTTAACG	3280	12.23933	34
TTAGACT	1060	12.216981	4
AACGGCC	3205	12.179406	37
AACGCAG	45210	12.153284	5
ACCGTAC	705	12.070922	27
GGCACCG	3455	11.994212	9
GCACCGC	3505	11.82311	10
CCGAGTT	1100	11.772727	13
ACCGCCT	3600	11.6652775	12
CGAACTA	3705	11.634278	24
GGGTAAG	1665	11.555555	1