ERR1042749.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042749.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6479344
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	38496	0.5941342209952118	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	29103	0.44916584148024863	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16651	0.2569858923989836	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	14164	0.21860237703076116	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC	7151	0.11036611113717686	No Hit
CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGT	7097	0.10953269343316238	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG	6981	0.10774238873564979	No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG	6944	0.10717134327178801	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	6641	0.10249494393259564	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATACAC	1735	20.579252	3
TTATACA	2175	16.245977	2
GGGTAAG	1065	15.286385	1
ATCTCGT	1990	15.153266	37
ATACACA	2630	15.123573	4
TACACAT	2510	14.962152	5
ATCTCCG	2215	14.699775	10
CTTATAC	2380	14.691176	1
CCCACGA	2130	14.330986	19
CCGAGTT	900	14.183333	13
ACGAGAC	2210	14.063349	22
TCTCCGA	2275	13.905496	11
CGAGCCC	2385	13.419287	15
CACGAGA	2285	13.358863	21
AGGTCGC	2000	13.227501	35
CGAACTA	2230	13.024664	24
TCTACAT	2405	13.0	32
TACATCT	2320	12.997846	34
ATTAGAG	1715	12.944607	3
GCCCACG	2445	12.93865	18