ERR1042741.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042741.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5512371
Sequences flagged as poor quality	0
Sequence length	43
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	16846	0.3056035234203213	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	15068	0.2733488003619495	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	10292	0.18670731705104754	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	8902	0.16149130746098184	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8663	0.15715560509261803	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	7158	0.12985337888179152	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	7036	0.1276401751623757	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	6207	0.11260127447880414	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTAACGG	1315	15.475285	35
GGGTAAG	655	15.251907	1
TAACGGC	1370	14.989051	36
GTATTAG	2210	14.984163	1
TATTAGA	1855	14.261456	2
ATTAGAG	1660	13.48494	3
GGCCTAA	1050	13.390475	10
GGGGTTA	1110	13.333333	6
TTTAACG	1585	13.305993	34
CTCTAAT	1555	12.4919615	1
TACCCCG	1015	12.394089	5
ATTAGAC	345	12.333334	3
TCTAATA	1635	12.220183	2
GTTTAAC	1715	12.189505	33
CTAATAC	1990	12.178391	3
TAATACT	1960	12.176021	4
AACGGCC	1700	12.079411	37
CTACACT	950	12.073684	4
TTAGACT	385	12.012986	4
ATGCTAG	1420	11.985916	15