ERR1042740.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042740.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6455726
Sequences flagged as poor quality	0
Sequence length	43
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	28953	0.4484855769901015	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	23871	0.3697647638700899	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14935	0.2313450106153824	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	14635	0.2266979732411196	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	10266	0.15902161894727254	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	7282	0.11279908719793871	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	7230	0.11199360071973315	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	6879	0.1065565669918457	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	6635	0.10277697659411196	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAACGGC	1655	15.3141985	36
TTAACGG	1695	15.280236	35
TATTAGA	2120	14.92217	2
GGGTAAG	795	14.893081	1
AATACTG	2465	14.634888	5
TAATACT	2435	14.58727	4
ATTAGAG	1960	14.535714	3
GGGGTTA	1605	14.292835	6
GTATTAG	2695	14.003711	1
ATACTGG	2400	13.875	6
TCTAATA	2235	13.740492	2
ATGCTAG	2010	13.71393	15
CTCTAAT	2125	13.581177	1
CTAATAC	2645	13.568998	3
GTGACAC	1940	13.445876	24
TAGGGGT	1590	13.380503	4
TACTGGT	2290	13.329694	7
TTTAACG	2040	12.968137	34
AACGGCC	2045	12.755502	37
ATAGGGG	1575	12.685714	3