ERR1042738.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042738.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8777840
Sequences flagged as poor quality	0
Sequence length	43
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	24639	0.2806954786143288	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	22807	0.2598247404828523	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	20507	0.23362239457543088	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	14229	0.16210138257247797	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	14053	0.16009633349434485	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	13628	0.15525459566362568	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	12576	0.14326987049205728	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11970	0.1363661219616671	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	10677	0.12163584663197324	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	9842	0.11212325583514851	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	9349	0.10650683995151428	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGTAAG	1330	15.857143	1
TTAACGG	2445	14.90593	35
TAACGGC	2485	14.442656	36
TATTAGA	3245	13.967643	2
CCGAGTT	1170	13.756411	13
ATTAGAG	2970	13.641414	3
TTTAACG	2820	13.186171	34
AATACTG	2940	12.899659	5
TAATACT	3430	12.890671	4
GTATTAG	3970	12.814861	1
GGTAAAC	2410	12.665975	35
AACGGCC	2890	12.546713	37
ACCAGTA	2065	12.542372	12
TCTAATA	3030	12.516502	2
GGTAAGA	1540	12.253246	2
CTCTAAT	2705	12.173752	1
ATGCTAG	2630	12.028517	15
GTTTAAC	3210	11.987538	33
CTAATAC	3485	11.944046	3
CTCTAGC	2620	11.933207	2