Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042730.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13020739 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 62360 | 0.4789282697395286 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 51089 | 0.3923663626158239 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 40544 | 0.31138017588709826 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 23861 | 0.18325380763718557 | No Hit |
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG | 15062 | 0.11567699805671552 | No Hit |
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC | 13586 | 0.10434123593138608 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTAACGG | 3450 | 0.0 | 15.443478 | 35 |
TAACGGC | 3525 | 0.0 | 15.114894 | 36 |
GGTAAAC | 4065 | 0.0 | 14.381304 | 35 |
ATTAGAG | 4215 | 0.0 | 14.308423 | 3 |
TATTAGA | 4580 | 0.0 | 14.299126 | 2 |
GTATTAG | 5420 | 0.0 | 14.267528 | 1 |
TAATACT | 5345 | 0.0 | 14.225445 | 4 |
ATGCTAG | 4195 | 0.0 | 14.156137 | 15 |
TTTAACG | 4010 | 0.0 | 13.932668 | 34 |
TCTAATA | 4850 | 0.0 | 13.464949 | 2 |
CTCTAAT | 4535 | 0.0 | 13.461963 | 1 |
AATACTG | 5195 | 0.0 | 13.425409 | 5 |
CTAATAC | 5495 | 0.0 | 13.33212 | 3 |
GGGGTTA | 2955 | 0.0 | 13.272419 | 6 |
AACGGCC | 4115 | 0.0 | 13.17254 | 37 |
TACTGGT | 4850 | 0.0 | 13.083506 | 7 |
ATACTGG | 5235 | 0.0 | 13.040115 | 6 |
GATGCTA | 4615 | 0.0 | 12.947996 | 14 |
GTGACAC | 4355 | 0.0 | 12.913892 | 24 |
GTTTAAC | 4545 | 0.0 | 12.69967 | 33 |