Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042722.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11893528 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 51625 | 0.4340595994729234 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 50610 | 0.42552554633074385 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 34823 | 0.2927894902168642 | No Hit |
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG | 25075 | 0.21082894831541996 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 21680 | 0.18228401194330227 | No Hit |
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG | 17387 | 0.14618875072224152 | No Hit |
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG | 15609 | 0.1312394438386995 | No Hit |
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT | 15077 | 0.1267664228814192 | No Hit |
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT | 12193 | 0.10251794084984707 | No Hit |
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG | 12096 | 0.10170237123921515 | No Hit |
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG | 12017 | 0.10103814444292727 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTAACGG | 2830 | 0.0 | 15.362191 | 35 |
TAACGGC | 2890 | 0.0 | 14.9792385 | 36 |
GGGGTTA | 2755 | 0.0 | 14.571689 | 6 |
TATTAGA | 3630 | 0.0 | 14.371901 | 2 |
GTATTAG | 4410 | 0.0 | 14.346939 | 1 |
ATTAGAG | 3570 | 0.0 | 13.939776 | 3 |
TTTAACG | 3305 | 0.0 | 13.881996 | 34 |
CTAATAC | 4660 | 0.0 | 13.696352 | 3 |
ATAGGGG | 2800 | 0.0 | 13.544642 | 3 |
TAGGGGT | 3035 | 0.0 | 13.532125 | 4 |
AATACTG | 4250 | 0.0 | 13.27647 | 5 |
TAATACT | 4710 | 0.0 | 13.236731 | 4 |
GGGTTAG | 3075 | 0.0 | 13.235772 | 7 |
TCTAATA | 4010 | 0.0 | 13.056109 | 2 |
CTCTAAT | 3740 | 0.0 | 12.959894 | 1 |
AACGGCC | 3390 | 0.0 | 12.824484 | 37 |
TAGGACC | 2380 | 0.0 | 12.514706 | 4 |
ATGCTAG | 3650 | 0.0 | 12.468493 | 15 |
TTAGAGG | 5320 | 0.0 | 12.310151 | 4 |
GGTAAAC | 3575 | 0.0 | 12.212588 | 35 |