ERR1042719.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042719.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15184952
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	130929	0.862228606320257	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	124171	0.8177240204644702	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	83483	0.5497745399524477	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	62421	0.41107143440427074	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	37516	0.24706037924914084	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	25358	0.1669942716974015	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	23607	0.15546311901413978	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	21759	0.14329317603374708	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18709	0.12320750174251455	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	18557	0.1222065107614433	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	17384	0.1144817579930447	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15645	0.1030296309135518	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15329	0.10094862334764049	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCTCGT	2250	14.388888	37
TATACAC	2915	14.279588	3
CACGAGA	2335	14.261243	21
TTAACGG	1335	13.996255	35
ACGAGAC	2390	13.855649	22
TATACTG	1790	12.918995	5
CTAGTAC	750	12.826668	3
GTACTAG	795	12.566037	1
GTATTAG	3335	12.536732	1
TAGGGGT	1875	12.530666	4
GGGGTTA	1835	12.098092	6
TAACGGC	1535	12.052117	36
CCCACGA	2810	11.91637	19
TAATACT	3090	11.914239	4
GGGTTAG	1875	11.642666	7
TACACAT	3770	11.629973	5
TTAGGAC	1885	11.4827585	3
TCTAGAC	1425	11.4245615	3
TAGGACC	2220	11.25	4
TCTCCGA	2935	11.219762	11