ERR1042711.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042711.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9985890
Sequences flagged as poor quality	0
Sequence length	43
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	18932	0.18958750797375096	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG	14426	0.14446383847608976	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	14076	0.1409588929980202	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	13391	0.1340992139909412	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	13126	0.13144546955754569	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	12910	0.1292824174910799	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	12484	0.1250163981377724	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	12363	0.12380468841535405	No Hit
TCCCAATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGA	11685	0.11701510831783647	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	11582	0.11598365293429029	No Hit
CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAT	11262	0.11277913135434098	No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG	10799	0.10814258919335182	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	10767	0.10782213703535688	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTAACGG	3135	15.16587	35
TAATACT	3790	14.546174	4
CTCTAAT	3070	14.462541	1
TATTAGA	3945	14.4436	2
TAACGGC	3295	14.42944	36
TAGGACC	2205	14.346938	4
ATTAGAG	3670	14.114441	3
ATGCTAG	2925	14.104274	15
AATACTG	3515	14.052631	5
GTATTAG	4845	14.0515995	1
TCTAATA	3420	13.9561405	2
GGGGTTA	1685	13.833827	6
TTAGGAC	2265	13.803531	3
TTTAACG	3655	13.463749	34
CTAATAC	4115	13.352368	3
GGTAAAC	3055	13.201309	35
ATACTGG	3655	13.10944	6
GTTTAAC	3830	13.041776	33
AACGGCC	3725	13.01208	37
GATGCTA	3250	12.978461	14