Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042693.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8676317 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 37081 | 0.4273818026704188 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 33184 | 0.38246643132103175 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 24067 | 0.27738728310641486 | No Hit |
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG | 18907 | 0.21791504390630262 | No Hit |
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT | 15689 | 0.18082557380049621 | No Hit |
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG | 12990 | 0.1497179044979569 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12449 | 0.1434825398841467 | No Hit |
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG | 11382 | 0.13118469507280567 | No Hit |
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG | 11245 | 0.12960568407078718 | No Hit |
CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGT | 10031 | 0.11561357197990806 | No Hit |
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT | 9684 | 0.11161417914997804 | No Hit |
TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG | 8909 | 0.10268181764220925 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTAACGG | 1695 | 0.0 | 14.625368 | 35 |
TAACGGC | 1715 | 0.0 | 14.346939 | 36 |
TAGGGGT | 1565 | 0.0 | 14.067093 | 4 |
GGGGTTA | 1600 | 0.0 | 13.990624 | 6 |
GTATTAG | 2870 | 0.0 | 13.085366 | 1 |
TAATACT | 3100 | 0.0 | 13.009677 | 4 |
ATAGGGG | 1715 | 0.0 | 12.836735 | 3 |
TCTAATA | 2690 | 0.0 | 12.585502 | 2 |
ATTAGAG | 2435 | 0.0 | 12.535934 | 3 |
CTAATAC | 3255 | 0.0 | 12.219662 | 3 |
TATTAGA | 2605 | 0.0 | 12.214972 | 2 |
GGGTTAG | 1725 | 0.0 | 12.011595 | 7 |
AACGGCC | 2120 | 0.0 | 11.955189 | 37 |
CTCTAAT | 2850 | 0.0 | 11.878947 | 1 |
TTTAACG | 2205 | 0.0 | 11.829931 | 34 |
AATACTG | 3410 | 0.0 | 11.82698 | 5 |
GTATAGG | 2745 | 0.0 | 11.794171 | 1 |
GGTAAAC | 2430 | 0.0 | 11.648148 | 35 |
TAGGACC | 1910 | 0.0 | 11.623036 | 4 |
GTACTAT | 1160 | 0.0 | 11.4827585 | 1 |