ERR1042689.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1042689.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5188757
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	32027	0.6172383867658479	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	31680	0.6105508506179804	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	16504	0.31807232445073064	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	13448	0.25917575249717806	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11265	0.2171040193248595	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	9989	0.1925123878416353	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	8886	0.17125488821311155	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	8130	0.15668492473245518	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	7429	0.14317494536745506	No Hit
CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGT	6904	0.1330569151725548	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	5982	0.11528772690646336	No Hit
TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG	5925	0.11418919791387418	No Hit
GGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAG	5448	0.1049962447653648	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCTCGT	1375	18.701818	37
CCCACGA	1465	18.310581	19
TATACAC	1790	18.189943	3
ATCTCCG	1515	17.70627	10
ACGAGAC	1585	17.274446	22
CACGAGA	1560	17.195513	21
TCTCCGA	1625	16.735384	11
GCCCACG	1720	15.703488	18
TACACAT	2030	15.492611	5
CGAGCCC	1775	15.321128	15
CATCTCG	1740	15.204023	36
ACCTCTC	1775	14.904226	27
CTACATC	1820	14.535715	33
TCTACAT	1860	14.422043	32
TACATCT	1825	14.19178	34
ACACATC	2140	14.177571	6
GACCTCT	1975	14.144304	26
TTATACA	2175	14.11954	2
TTAACGG	875	13.954286	35
CGAGACC	1940	13.82732	23