Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042676.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9766328 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 7615 | 0.0 | 25.31451 | 1 |
GTATCAA | 11915 | 0.0 | 16.11666 | 2 |
TATACTG | 1170 | 0.0 | 12.965813 | 5 |
ATCTCGT | 1255 | 0.0 | 12.677291 | 37 |
TATACAC | 1655 | 0.0 | 12.63142 | 3 |
GTCGTAT | 105 | 0.0026460167 | 12.333333 | 1 |
GTCGGGA | 2385 | 0.0 | 11.790357 | 2 |
ATTAGAG | 1745 | 0.0 | 11.661891 | 3 |
TCTATAC | 690 | 0.0 | 11.528986 | 3 |
TTAGACT | 785 | 0.0 | 11.312102 | 4 |
TACTCCG | 2285 | 0.0 | 11.172867 | 5 |
TTAACGG | 1315 | 0.0 | 11.114069 | 35 |
ATCAACG | 18820 | 0.0 | 11.048884 | 2 |
TATTAGA | 1845 | 0.0 | 11.02981 | 2 |
TACACAT | 2290 | 0.0 | 10.9869 | 5 |
TCAACGC | 19310 | 0.0 | 10.787675 | 3 |
AACGCAG | 19305 | 0.0 | 10.780886 | 5 |
TAATACT | 1925 | 0.0 | 10.763637 | 4 |
TATAGTG | 970 | 0.0 | 10.680412 | 5 |
CAACGCA | 19620 | 0.0 | 10.588941 | 4 |