Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042627.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4330297 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 52 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGTTTA | 390 | 0.0 | 17.551283 | 30 |
GGTATCA | 2000 | 0.0 | 17.205 | 1 |
TACACCG | 415 | 0.0 | 16.048193 | 5 |
GTATAAG | 515 | 0.0 | 15.087379 | 1 |
ATAACGC | 515 | 0.0 | 14.728156 | 3 |
GACGGAC | 530 | 0.0 | 14.660377 | 7 |
TAACGCC | 535 | 0.0 | 14.523365 | 4 |
TATACCG | 220 | 1.8189894E-11 | 14.295454 | 5 |
GTATACT | 390 | 0.0 | 14.23077 | 4 |
CGAACGA | 260 | 0.0 | 14.230769 | 16 |
TATAAGG | 520 | 0.0 | 14.230769 | 2 |
CGTTTAT | 505 | 0.0 | 13.920792 | 31 |
GTATTAG | 710 | 0.0 | 13.549296 | 1 |
GTGTTAG | 690 | 0.0 | 13.405797 | 1 |
GTTAGCC | 525 | 0.0 | 13.390475 | 3 |
ATAGTAC | 415 | 0.0 | 13.373494 | 3 |
ACGGACC | 515 | 0.0 | 13.291263 | 8 |
GTATTAA | 335 | 0.0 | 13.253732 | 1 |
CTTACAC | 630 | 0.0 | 13.214285 | 3 |
AATAACG | 535 | 0.0 | 13.140187 | 2 |