Basic Statistics
Measure | Value |
---|---|
Filename | ERR1042625.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5642468 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 13263 | 0.23505671631633535 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11891 | 0.2107411154126173 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 8440 | 0.14957993558846944 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4880 | 0.0 | 20.96414 | 1 |
CTAGTAC | 560 | 0.0 | 16.1875 | 3 |
TCTAACG | 160 | 6.311893E-10 | 16.1875 | 2 |
TAGACCG | 95 | 7.067497E-5 | 15.578948 | 5 |
CGCGAAT | 180 | 2.0190782E-10 | 15.416666 | 35 |
GTATCAA | 6715 | 0.0 | 15.152643 | 2 |
TCTATAC | 770 | 0.0 | 15.136363 | 3 |
CTAACGC | 185 | 3.0559022E-10 | 15.0 | 3 |
TATACTG | 1010 | 0.0 | 14.836634 | 5 |
TCTAGCG | 355 | 0.0 | 14.591549 | 28 |
TAACGCC | 590 | 0.0 | 14.423729 | 4 |
GTATAAG | 1070 | 0.0 | 14.004673 | 1 |
GTACTAG | 530 | 0.0 | 13.962263 | 1 |
TAGTACT | 730 | 0.0 | 13.938356 | 4 |
TACGACG | 435 | 0.0 | 13.609196 | 5 |
TTACACT | 940 | 0.0 | 13.382979 | 4 |
CGAACGA | 265 | 1.8189894E-12 | 13.26415 | 16 |
TGCGACG | 280 | 0.0 | 13.214285 | 22 |
TAATACT | 1110 | 0.0 | 13.166667 | 4 |
TAGGACG | 380 | 0.0 | 13.144737 | 4 |