ERR1042612.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	ERR1042612.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	110906
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTGTGC	35	8.818752E-4	26.42857	8
TGGACTG	60	9.165281E-4	18.5	5
TCAGCAC	60	9.165281E-4	18.5	3
TAATCCC	50	0.0069958516	18.5	5
GTATCAA	65	0.001567798	17.076923	1
ACCTGTC	80	0.0062514306	13.875	37
CTCCCAA	80	0.0062514306	13.875	23
GTAATCC	80	0.0062514306	13.875	4
TCCCAAA	80	0.0062514306	13.875	24
CGGCCTC	95	0.001232705	13.631579	19
CAGCACT	105	0.0026176863	12.333334	4
ATCAACG	105	0.0026176863	12.333334	2
AACGCAG	105	0.0026176863	12.333334	6
TCAACGC	105	0.0026176863	12.333334	3
TATCAAC	110	0.0037086548	11.772727	1
GCCTCCC	145	0.002462225	10.206897	21